RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, human

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-223	ENST00000436442	CNP	P09543	421 aa	Known RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	EIF4B	P23588	611 aa	Known RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	ABI1	Q8IZP0	508 aa		11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	SRBD1	Q8N5C6	995 aa	Known RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	GPR161	Q8N6U8	529 aa	Known RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	ZNF707	Q96C28	371 aa	Predicted RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	RRP36	Q96EU6	259 aa	Known RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	MRPL9	Q9BYD2	267 aa	Known RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	FOXQ1	Q9C009	403 aa		11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	OSBPL3	Q9H4L5	887 aa		11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	NRDE2	Q9H7Z3	1164 aa		11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	ARHGEF3	Q9NR81	526 aa		11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	SLC2A4RG	Q9NR83	387 aa		11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	SETX	Q7Z333	2677 aa	Known RBP	11.29	□□□□□ -0.6
RPP21-223	ENST00000436442	DCDC2B	A2VCK2	349 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	PRR5-ARHGAP8	B1AHC4	643 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	STK25	O00506	426 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	SPTLC1	O15269	473 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	KIN	O60870	393 aa	Known RBP	11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	PLEKHA8P1	O95397	391 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	CYP21A2	P08686	494 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	NLRP11	P59045	1033 aa	Known RBP	11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	ARHGAP8	P85298	464 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	HTR4	Q13639	388 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	CEP55	Q53EZ4	464 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	CYP26C1	Q6V0L0	522 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	SDF4	Q9BRK5	362 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	RTKN	Q9BST9	563 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	EPC1	Q9H2F5	836 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	PARD6A	Q9NPB6	346 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	TBC1D13	Q9NVG8	400 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	DNAJB4	Q9UDY4	337 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	RALY	Q9UKM9	306 aa	Known RBP	11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	FBXO4	Q9UKT5	387 aa		11.28	□□□□□ -0.6
RPP21-223	ENST00000436442	MEIS3P2	A8K0S8	358 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	LAMP2	P13473	410 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	DARS	P14868	501 aa	Known RBP	11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	ZSCAN20	P17040	1043 aa	Predicted RBP	11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	SLC11A1	P49279	550 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	CLCN3	P51790	818 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	BMS1	Q14692	1282 aa	Known RBP	11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	SWSAP1	Q6NVH7	229 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	DCLRE1A	Q6PJP8	1040 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	PLEKHM2	Q8IWE5	1019 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	RNF169	Q8NCN4	708 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	BBX	Q8WY36	941 aa	Predicted RBP	11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	RSPH1	Q8WYR4	309 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	ZNF302	Q9NR11	478 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	PCDHGA2	Q9Y5H1	932 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	CLUH	O75153	1309 aa		11.27	□□□□□ -0.61
RPP21-223	ENST00000436442	NOTCH4	Q99466	2003 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	DMXL2	Q8TDJ6	3036 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	ITPR1	Q14643	2758 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	AKAP13	Q12802	2813 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	CARNS1	A5YM72	827 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	SPDYE3	A6NKU9	549 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	FGFR4	P22455	802 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	KLRC2	P26717	231 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	GBP2	P32456	591 aa	Predicted RBP	11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	CA8	P35219	290 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	PHKA2	P46019	1235 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	GPC3	P51654	580 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	LMNB2	Q03252	620 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	HDAC1	Q13547	482 aa	Predicted RBP	11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	NONO	Q15233	471 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	FAM160B1	Q5W0V3	765 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	TYW1B	Q6NUM6	668 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	PDXDC2P	Q6P474	469 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	CATIP	Q7Z7H3	387 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	ZNF280B	Q86YH2	543 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	RNF168	Q8IYW5	571 aa	Predicted RBP	11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	CMTR1	Q8N1G2	835 aa	Known RBP	11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	CRYGN	Q8WXF5	182 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	MYL10	Q9BUA6	226 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	RPP25	Q9BUL9	199 aa	Known RBP	11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	LY9	Q9HBG7	655 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	NCDN	Q9UBB6	729 aa		11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	MTF2	Q9Y483	593 aa	Predicted RBP	11.26	□□□□□ -0.61
RPP21-223	ENST00000436442	RALGAPA1	Q6GYQ0	2036 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	IGLV3-22	A0A075B6J6	115 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	CCDC195	A0A1B0GUA6	201 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442		E7EWF7	191 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	BACH1	O14867	736 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	OFD1	O75665	1012 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	RFPL2	O75678	378 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	DDHD2	O94830	711 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	COL9A3	Q14050	684 aa	Predicted RBP	11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	NIPA1	Q7RTP0	329 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	ZNF654	Q8IZM8	581 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	ZNF710	Q8N1W2	664 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	METTL13	Q8N6R0	699 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	LPP	Q93052	612 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	ZNF668	Q96K58	619 aa	Predicted RBP	11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	LZTS2	Q9BRK4	669 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	OSBPL6	Q9BZF3	934 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	MAN1C1	Q9NR34	630 aa		11.25	□□□□□ -0.61
RPP21-223	ENST00000436442	CHST12	Q9NRB3	414 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms