RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 LRRIQ4A6NIV6 560 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 BECN2A8MW95 431 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 PRPF6O94906 941 aaKnown RBP23.54■■□□□ 1.36
YBX1-203ENST00000436427 ERCC5P28715 1186 aaPredicted RBP23.54■■□□□ 1.36
YBX1-203ENST00000436427 NCKAP1LP55160 1127 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 HIC1Q14526 733 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 MXD4Q14582 209 aaPredicted RBP23.54■■□□□ 1.36
YBX1-203ENST00000436427 EPM2AIP1Q7L775 607 aaPredicted RBP23.54■■□□□ 1.36
YBX1-203ENST00000436427 LUZP1Q86V48 1076 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 RHPN2Q8IUC4 686 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 NELFCDQ8IXH7 590 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 SLC17A8Q8NDX2 589 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 SPIRE2Q8WWL2 714 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 ARMC5Q96C12 935 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 DHTKD1Q96HY7 919 aaPredicted RBP23.54■■□□□ 1.36
YBX1-203ENST00000436427 AKT3Q9Y243 479 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 PCDHB13Q9Y5F0 798 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 GJB1P08034 283 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 NAMPTP43490 491 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 ZNF200P98182 395 aaPredicted RBP23.54■■□□□ 1.36
YBX1-203ENST00000436427 LAMTOR4Q0VGL1 99 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 CAPSQ13938 189 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 HAUS6Q7Z4H7 955 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 KSR1Q8IVT5 923 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 LINC01465Q8N7H1 131 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 MAP7D2Q96T17 732 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 GTF2IRD1Q9UHL9 959 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 KCNG1Q9UIX4 513 aa23.54■■□□□ 1.36
YBX1-203ENST00000436427 A0A1W2PQ45 241 aaPredicted RBP23.53■■□□□ 1.36
YBX1-203ENST00000436427 A0A1W2PQY0 241 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 MBLAC1A4D2B0 266 aaPredicted RBP23.53■■□□□ 1.36
YBX1-203ENST00000436427 DNM1LO00429 736 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 EIF3DO15371 548 aaKnown RBP eCLIP23.53■■□□□ 1.36
YBX1-203ENST00000436427 TREHO43280 583 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 CYP2C9P11712 490 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 ITGA7Q13683 1181 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 ALCAMQ13740 583 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 DHX40Q8IX18 779 aaKnown RBP23.53■■□□□ 1.36
YBX1-203ENST00000436427 DEPTORQ8TB45 409 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 NTPCRQ9BSD7 190 aaKnown RBP23.53■■□□□ 1.36
YBX1-203ENST00000436427 RWDD2AQ9UIY3 292 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 OGDHLQ9ULD0 1010 aa23.53■■□□□ 1.36
YBX1-203ENST00000436427 SRGAP2CP0DJJ0 459 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 HOXC8P31273 242 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 ADAM17P78536 824 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 MYL5Q02045 173 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 IQCB1Q15051 598 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 TMEM161BQ8NDZ6 487 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 ZNF507Q8TCN5 953 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 P2RX5Q93086 422 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 NLRP4Q96MN2 994 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 FAM49AQ9H0Q0 323 aaPredicted RBP23.52■■□□□ 1.36
YBX1-203ENST00000436427 STARD7Q9NQZ5 370 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 PHF24Q9UPV7 400 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 ADGRA3Q8IWK6 1321 aa23.52■■□□□ 1.36
YBX1-203ENST00000436427 DENND3A2RUS2 1198 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 TRIM49BA6NDI0 452 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 SMTNL1A8MU46 457 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 VTNP04004 478 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 CCNE1P24864 410 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 TFDP1Q14186 410 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 BMT2Q1RMZ1 405 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 GDF6Q6KF10 455 aaPredicted RBP23.51■■□□□ 1.35
YBX1-203ENST00000436427 RUFY4Q6ZNE9 571 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 RNF149Q8NC42 400 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 ZNF668Q96K58 619 aaPredicted RBP23.51■■□□□ 1.35
YBX1-203ENST00000436427 PPP1R16BQ96T49 567 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 ST6GALNAC4Q9H4F1 302 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 PRDM10Q9NQV6 1147 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 GRIN2DO15399 1336 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 UBE4BO95155 1302 aa23.51■■□□□ 1.35
YBX1-203ENST00000436427 EVPLQ92817 2033 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 SMIM35A0A1B0GVV1 85 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 BICDL2A1A5D9 508 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 H0YCG3 227 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 GOLGA6L19H0YKK7 550 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 ASAP2O43150 1006 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 PPP1R37O75864 691 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 TFRCP02786 760 aaKnown RBP23.5■■□□□ 1.35
YBX1-203ENST00000436427 PMS1P54277 932 aaKnown RBP23.5■■□□□ 1.35
YBX1-203ENST00000436427 GTF2BQ00403 316 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 KCNA1Q09470 495 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 KNOP1Q1ED39 458 aaKnown RBP23.5■■□□□ 1.35
YBX1-203ENST00000436427 SESTD1Q86VW0 696 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 KIAA0319LQ8IZA0 1049 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 ENOX1Q8TC92 643 aaKnown RBP23.5■■□□□ 1.35
YBX1-203ENST00000436427 U2AF1L4Q8WU68 220 aaKnown RBP23.5■■□□□ 1.35
YBX1-203ENST00000436427 MED15Q96RN5 788 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 STRA6Q9BX79 667 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 SEMA6BQ9H3T3 888 aa23.5■■□□□ 1.35
YBX1-203ENST00000436427 IKBKBO14920 756 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 SGPL1O95470 568 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 TPD52L1Q16890 204 aaPredicted RBP23.49■■□□□ 1.35
YBX1-203ENST00000436427 CENPPQ6IPU0 288 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 SYCP3Q8IZU3 236 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 ACCSQ96QU6 501 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 TSG101Q99816 390 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 ARHGAP28Q9P2N2 729 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 HOXD13P35453 343 aa23.49■■□□□ 1.35
YBX1-203ENST00000436427 ANKRD40Q6AI12 368 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms