RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 PPP1R16BQ96T49 567 aa17.02■□□□□ 0.32
NELFE-204ENST00000436289 GLT8D2Q9H1C3 349 aa17.02■□□□□ 0.32
NELFE-204ENST00000436289 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.32
NELFE-204ENST00000436289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.02■□□□□ 0.32
NELFE-204ENST00000436289 DLGAP2Q9P1A6 1054 aa17.02■□□□□ 0.32
NELFE-204ENST00000436289 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
NELFE-204ENST00000436289 EVPLQ92817 2033 aa17.02■□□□□ 0.32
NELFE-204ENST00000436289 NARSO43776 548 aaKnown RBP17.01■□□□□ 0.31
NELFE-204ENST00000436289 ZC3H11AO75152 810 aaKnown RBP eCLIP17.01■□□□□ 0.31
NELFE-204ENST00000436289 CCNE2O96020 404 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 C1RP00736 705 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 GALTP07902 379 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 GBP2P32456 591 aaPredicted RBP17.01■□□□□ 0.31
NELFE-204ENST00000436289 LMNB2Q03252 620 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 PTPN14Q15678 1187 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 EFCAB12Q6NXP0 572 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 AUTS2Q8WXX7 1259 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 FAM167AQ96KS9 214 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 KLHL5Q96PQ7 755 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 TBC1D22BQ9NU19 505 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 NCDNQ9UBB6 729 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 FBXO4Q9UKT5 387 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 GPR179Q6PRD1 2367 aa17.01■□□□□ 0.31
NELFE-204ENST00000436289 E7EWF7 191 aa17■□□□□ 0.31
NELFE-204ENST00000436289 DARSP14868 501 aaKnown RBP17■□□□□ 0.31
NELFE-204ENST00000436289 ATP4AP20648 1035 aa17■□□□□ 0.31
NELFE-204ENST00000436289 ZNF76P36508 570 aa17■□□□□ 0.31
NELFE-204ENST00000436289 ATXN1P54253 815 aaKnown RBP17■□□□□ 0.31
NELFE-204ENST00000436289 SPECC1Q5M775 1068 aa17■□□□□ 0.31
NELFE-204ENST00000436289 DENND4AQ7Z401 1863 aa17■□□□□ 0.31
NELFE-204ENST00000436289 SMAP1Q8IYB5 467 aaPredicted RBP17■□□□□ 0.31
NELFE-204ENST00000436289 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
NELFE-204ENST00000436289 RTKNQ9BST9 563 aa17■□□□□ 0.31
NELFE-204ENST00000436289 ARHGEF3Q9NR81 526 aa17■□□□□ 0.31
NELFE-204ENST00000436289 SLC2A4RGQ9NR83 387 aa17■□□□□ 0.31
NELFE-204ENST00000436289 MRPL17Q9NRX2 175 aaKnown RBP17■□□□□ 0.31
NELFE-204ENST00000436289 CA14Q9ULX7 337 aa17■□□□□ 0.31
NELFE-204ENST00000436289 DCNP07585 359 aaKnown RBP16.99■□□□□ 0.31
NELFE-204ENST00000436289 PSAPP07602 524 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 RNASELQ05823 741 aaKnown RBP16.99■□□□□ 0.31
NELFE-204ENST00000436289 AAMPQ13685 434 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 ST3GAL2Q16842 350 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 NOMO2Q5JPE7 1267 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 ZNF746Q6NUN9 644 aaPredicted RBP16.99■□□□□ 0.31
NELFE-204ENST00000436289 DCLRE1AQ6PJP8 1040 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 CASC1Q6TDU7 716 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 HDAC7Q8WUI4 952 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 ATRIPQ8WXE1 791 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 NRDE2Q9H7Z3 1164 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 LY9Q9HBG7 655 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 NRBP2Q9NSY0 501 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 TCEAL9Q9UHQ7 104 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 CDV3Q9UKY7 258 aaKnown RBP16.99■□□□□ 0.31
NELFE-204ENST00000436289 PCDHGA2Q9Y5H1 932 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 PCDHA10Q9Y5I2 948 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 ZFP37Q9Y6Q3 630 aaPredicted RBP16.99■□□□□ 0.31
NELFE-204ENST00000436289 FANCMQ8IYD8 2048 aa16.99■□□□□ 0.31
NELFE-204ENST00000436289 CACNA1IQ9P0X4 2223 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 CCDC195A0A1B0GUA6 201 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 DHX15O43143 795 aaKnown RBP16.98■□□□□ 0.31
NELFE-204ENST00000436289 LILRB3O75022 631 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 ALDH2P05091 517 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 CNPP09543 421 aaKnown RBP16.98■□□□□ 0.31
NELFE-204ENST00000436289 SREBF1P36956 1147 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 MAGEA9P43362 315 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 PHKA2P46019 1235 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 STARD6P59095 220 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 AP3B2Q13367 1082 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 HEATR3Q7Z4Q2 680 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 TMEM173Q86WV6 379 aaPredicted RBP16.98■□□□□ 0.31
NELFE-204ENST00000436289 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 LINC01465Q8N7H1 131 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 PJA1Q8NG27 643 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 GPR152Q8TDT2 470 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 SCLT1Q96NL6 688 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 BCO2Q9BYV7 579 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 INO80BQ9C086 356 aaPredicted RBP16.98■□□□□ 0.31
NELFE-204ENST00000436289 RIC8AQ9NPQ8 531 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 TBC1D13Q9NVG8 400 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 KANSL3Q9P2N6 904 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 CHD6Q8TD26 2715 aa16.98■□□□□ 0.31
NELFE-204ENST00000436289 CCDC69A6NI79 296 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 DDX39AO00148 427 aaKnown RBP16.97■□□□□ 0.31
NELFE-204ENST00000436289 IPO5O00410 1097 aaKnown RBP16.97■□□□□ 0.31
NELFE-204ENST00000436289 N4BP1O75113 896 aaKnown RBP16.97■□□□□ 0.31
NELFE-204ENST00000436289 ZNF623O75123 536 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 PLEKHA8P1O95397 391 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 PAPLNO95428 1278 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 ADH1AP07327 375 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 RAB27AP51159 221 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 GPC3P51654 580 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 CLCN3P51790 818 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 PPP1R18Q6NYC8 613 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 NFXL1Q6ZNB6 911 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 RSAD2Q8WXG1 361 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 PGBD4Q96DM1 585 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 TMEM87BQ96K49 555 aa16.97■□□□□ 0.31
NELFE-204ENST00000436289 MYL10Q9BUA6 226 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms