RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RNF40O75150 1001 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 FGFR1P11362 822 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 IFNAR1P17181 557 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 DNAJB1P25685 340 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 HSPA4P34932 840 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 IRS1P35568 1242 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 PRSS12P56730 875 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 NLRP11P59045 1033 aaKnown RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 KRT17Q04695 432 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 DLX2Q07687 328 aaPredicted RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 SSRP1Q08945 709 aaKnown RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 ADAM15Q13444 863 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 EFCAB12Q6NXP0 572 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 MIER3Q7Z3K6 550 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 ADGRD2Q7Z7M1 963 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 ZBTB33Q86T24 672 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 FAM228AQ86W67 206 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 LRRC71Q8N4P6 559 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 COLGALT1Q8NBJ5 622 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 SMRP1Q8NCR6 262 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 TMEM40Q8WWA1 233 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 CDCA3Q99618 268 aaPredicted RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 ELAC1Q9H777 363 aaKnown RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 SH3GLB2Q9NR46 395 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 TYW1Q9NV66 732 aaKnown RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 DACT1Q9NYF0 836 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 MUTYHQ9UIF7 546 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 BARX2Q9UMQ3 279 aaPredicted RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 USP15Q9Y4E8 981 aaPredicted RBP8.74□□□□□ -1.01
VPS50-203ENST00000436177 CYP46A1Q9Y6A2 500 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 TTC3P53804 2025 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 RALGAPA2Q2PPJ7 1873 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 MARCH6O60337 910 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 CDKL5O76039 1030 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 SFPQP23246 707 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS50-203ENST00000436177 EIF4BP23588 611 aaKnown RBP8.73□□□□□ -1.01
VPS50-203ENST00000436177 CIITAP33076 1130 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 USP11P51784 963 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 CCT2P78371 535 aaKnown RBP8.73□□□□□ -1.01
VPS50-203ENST00000436177 CDC42EP1Q00587 391 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 COASYQ13057 564 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 PKN1Q16512 942 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 FAM102BQ5T8I3 360 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 PLPP4Q5VZY2 271 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 RNF135Q8IUD6 432 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 SUGP1Q8IWZ8 645 aaKnown RBP8.73□□□□□ -1.01
VPS50-203ENST00000436177 CRIPAKQ8N1N5 446 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 RDM1Q8NG50 284 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 CRYGNQ8WXF5 182 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 TCF25Q9BQ70 676 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 JPH2Q9BR39 696 aaPredicted RBP8.73□□□□□ -1.01
VPS50-203ENST00000436177 MRPL9Q9BYD2 267 aaKnown RBP8.73□□□□□ -1.01
VPS50-203ENST00000436177 GCOM2Q9BZD3 368 aaPredicted RBP8.73□□□□□ -1.01
VPS50-203ENST00000436177 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
VPS50-203ENST00000436177 LZTS1Q9Y250 596 aa8.73□□□□□ -1.01
VPS50-203ENST00000436177 ZDBF2Q9HCK1 2354 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 CARNS1A5YM72 827 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 PER2O15055 1255 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 MSH4O15457 936 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 GPR32O75388 356 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 DEXIO95424 95 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 EYA4O95677 639 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 DARSP14868 501 aaKnown RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 XBP1P17861 261 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 ATP4AP20648 1035 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 PDIA3P30101 505 aaKnown RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 ALDH7A1P49419 539 aaKnown RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 CAMK1Q14012 370 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 MTERF2Q49AM1 385 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 TPRNQ4KMQ1 711 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 XKR3Q5GH77 459 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 HERC4Q5GLZ8 1057 aaPredicted RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 TWF2Q6IBS0 349 aaKnown RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 GALNT17Q6IS24 598 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 KCNT2Q6UVM3 1135 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 GLB1LQ6UWU2 654 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 FAM177A1Q8N128 213 aaPredicted RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 TBCKQ8TEA7 893 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 RSPH1Q8WYR4 309 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 MRPS27Q92552 414 aaKnown RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 SLC5A5Q92911 643 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 KCNB2Q92953 911 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 LENG9Q96B70 501 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 TMEM169Q96HH4 297 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 ZNF668Q96K58 619 aaPredicted RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 MSLNLQ96KJ4 702 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 RPGRIP1Q96KN7 1286 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 PHF7Q9BWX1 381 aaPredicted RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 KCNH6Q9H252 994 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 SLKQ9H2G2 1235 aaPredicted RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 UNC45AQ9H3U1 944 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 NGRNQ9NPE2 291 aaKnown RBP8.72□□□□□ -1.01
VPS50-203ENST00000436177 SPG21Q9NZD8 308 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 PCDHA4Q9UN74 947 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 PCDHGC5Q9Y5F6 944 aa8.72□□□□□ -1.01
VPS50-203ENST00000436177 NLRC5Q86WI3 1866 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms