RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 KCNK18Q7Z418 384 aa23.29■■□□□ 1.32
GTF3A-203ENST00000435781 RNF149Q8NC42 400 aa23.29■■□□□ 1.32
GTF3A-203ENST00000435781 PNMA5Q96PV4 448 aa23.29■■□□□ 1.32
GTF3A-203ENST00000435781 POLR3FQ9H1D9 316 aaPredicted RBP23.29■■□□□ 1.32
GTF3A-203ENST00000435781 GPRC5CQ9NQ84 441 aa23.29■■□□□ 1.32
GTF3A-203ENST00000435781 RGS18Q9NS28 235 aa23.29■■□□□ 1.32
GTF3A-203ENST00000435781 DNM3Q9UQ16 869 aa23.29■■□□□ 1.32
GTF3A-203ENST00000435781 TCHHQ07283 1943 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 EYA4O95677 639 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 F13A1P00488 732 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 CYP11B2P19099 503 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 SFPQP23246 707 aaKnown RBP eCLIP23.28■■□□□ 1.32
GTF3A-203ENST00000435781 GLRA2P23416 452 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 MARCKSP29966 332 aaPredicted RBP23.28■■□□□ 1.32
GTF3A-203ENST00000435781 TAP1Q03518 808 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 GRB10Q13322 594 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 GRIN2CQ14957 1233 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 MAEAQ7L5Y9 396 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 SRGAP1Q7Z6B7 1085 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 CABP7Q86V35 215 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 NPAS4Q8IUM7 802 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 CRIPAKQ8N1N5 446 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 YME1L1Q96TA2 773 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 C1orf112Q9NSG2 853 aa23.28■■□□□ 1.32
GTF3A-203ENST00000435781 FBXO2Q9UK22 296 aaPredicted RBP23.28■■□□□ 1.32
GTF3A-203ENST00000435781 COL4A4P53420 1690 aaPredicted RBP23.28■■□□□ 1.32
GTF3A-203ENST00000435781 C9IYK1 514 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 SARSP49591 514 aaKnown RBP23.27■■□□□ 1.32
GTF3A-203ENST00000435781 CAPSQ13938 189 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 BECN1Q14457 450 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 TMEM119Q4V9L6 283 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 SLC24A5Q71RS6 500 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 SP7Q8TDD2 431 aaPredicted RBP23.27■■□□□ 1.32
GTF3A-203ENST00000435781 CDX2Q99626 313 aaPredicted RBP23.27■■□□□ 1.32
GTF3A-203ENST00000435781 NT5C3AQ9H0P0 336 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 MINDY3Q9H8M7 445 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 MORC2Q9Y6X9 1032 aaPredicted RBP23.27■■□□□ 1.32
GTF3A-203ENST00000435781 COL6A3P12111 3177 aa23.27■■□□□ 1.32
GTF3A-203ENST00000435781 LINC01553A4QN01 128 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 SLC26A4O43511 780 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 UBA7P41226 1012 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 PHKA2P46019 1235 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 NASPP49321 788 aaPredicted RBP23.26■■□□□ 1.31
GTF3A-203ENST00000435781 PTENP60484 403 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 TFDP1Q14186 410 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 SLC39A14Q15043 492 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 FAM102BQ5T8I3 360 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 CATSPER4Q7RTX7 472 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 KCTD17Q8N5Z5 321 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 CDK5RAP3Q96JB5 506 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 ZNF396Q96N95 335 aaPredicted RBP23.26■■□□□ 1.31
GTF3A-203ENST00000435781 PLIN2Q99541 437 aa23.26■■□□□ 1.31
GTF3A-203ENST00000435781 RC3H2Q9HBD1 1191 aaKnown RBP23.26■■□□□ 1.31
GTF3A-203ENST00000435781 SRPRBQ9Y5M8 271 aaKnown RBP23.26■■□□□ 1.31
GTF3A-203ENST00000435781 STAG3L1P0CL83 205 aa23.25■■□□□ 1.31
GTF3A-203ENST00000435781 ZSCAN20P17040 1043 aaPredicted RBP23.25■■□□□ 1.31
GTF3A-203ENST00000435781 IBSPP21815 317 aaPredicted RBP23.25■■□□□ 1.31
GTF3A-203ENST00000435781 POU5F1BQ06416 359 aa23.25■■□□□ 1.31
GTF3A-203ENST00000435781 SPRED2Q7Z698 418 aa23.25■■□□□ 1.31
GTF3A-203ENST00000435781 CSRNP2Q9H175 543 aa23.25■■□□□ 1.31
GTF3A-203ENST00000435781 PRDM12Q9H4Q4 367 aa23.25■■□□□ 1.31
GTF3A-203ENST00000435781 DGKIO75912 1065 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 FAM189BP81408 668 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 IFNLR1Q8IU57 520 aaPredicted RBP23.24■■□□□ 1.31
GTF3A-203ENST00000435781 MYLIPQ8WY64 445 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 CALML4Q96GE6 196 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 CLIC6Q96NY7 704 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 CERS4Q9HA82 394 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 CHST12Q9NRB3 414 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 TFIP11Q9UBB9 837 aaKnown RBP23.24■■□□□ 1.31
GTF3A-203ENST00000435781 LRFN2Q9ULH4 789 aa23.24■■□□□ 1.31
GTF3A-203ENST00000435781 PIN4Q9Y237 131 aaKnown RBP23.24■■□□□ 1.31
GTF3A-203ENST00000435781 STK38Q15208 465 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 FOXD4L6Q3SYB3 417 aaPredicted RBP23.23■■□□□ 1.31
GTF3A-203ENST00000435781 SPECC1Q5M775 1068 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 FOXD4L3Q6VB84 417 aaPredicted RBP23.23■■□□□ 1.31
GTF3A-203ENST00000435781 USP49Q70CQ1 688 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 LINC00301Q8NCQ3 95 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 BSNDQ8WZ55 320 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 ZNF689Q96CS4 500 aaPredicted RBP23.23■■□□□ 1.31
GTF3A-203ENST00000435781 RUSC1Q9BVN2 902 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 NFKBIZQ9BYH8 718 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 CCSER1Q9C0I3 900 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 AGPAT5Q9NUQ2 364 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 PCDHB7Q9Y5E2 793 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 ADGRA3Q8IWK6 1321 aa23.23■■□□□ 1.31
GTF3A-203ENST00000435781 LRRIQ4A6NIV6 560 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 MBTD1Q05BQ5 628 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 KARSQ15046 597 aaKnown RBP23.22■■□□□ 1.31
GTF3A-203ENST00000435781 RINT1Q6NUQ1 792 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 SYT2Q8N9I0 419 aaPredicted RBP23.22■■□□□ 1.31
GTF3A-203ENST00000435781 KRI1Q8N9T8 703 aaKnown RBP23.22■■□□□ 1.31
GTF3A-203ENST00000435781 LRRC15Q8TF66 581 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 KIFAP3Q92845 792 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 EPSTI1Q96J88 318 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 TGS1Q96RS0 853 aaKnown RBP23.22■■□□□ 1.31
GTF3A-203ENST00000435781 ELAC1Q9H777 363 aaKnown RBP23.22■■□□□ 1.31
GTF3A-203ENST00000435781 POLD4Q9HCU8 107 aa23.22■■□□□ 1.31
GTF3A-203ENST00000435781 RNF216Q9NWF9 866 aaPredicted RBP23.22■■□□□ 1.31
GTF3A-203ENST00000435781 TMEM161AQ9NX61 479 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms