RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 UBALD2Q8IYN6 164 aa15.35■□□□□ 0.05
LINC00028-201ENST00000435497 TMEM105Q8N8V8 129 aa15.35■□□□□ 0.05
LINC00028-201ENST00000435497 AUTS2Q8WXX7 1259 aa15.35■□□□□ 0.05
LINC00028-201ENST00000435497 GJA10Q969M2 543 aa15.35■□□□□ 0.05
LINC00028-201ENST00000435497 NECTIN4Q96NY8 510 aa15.35■□□□□ 0.05
LINC00028-201ENST00000435497 NAP1L2Q9ULW6 460 aaPredicted RBP15.35■□□□□ 0.05
LINC00028-201ENST00000435497 DMDP11532 3685 aa15.35■□□□□ 0.05
LINC00028-201ENST00000435497 VPS13AQ96RL7 3174 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 PROB1E7EW31 1015 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 EPCAMP16422 314 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 GNA11P29992 359 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 MTHFRP42898 656 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 ALDH7A1P49419 539 aaKnown RBP15.34■□□□□ 0.05
LINC00028-201ENST00000435497 MTMR3Q13615 1198 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 NTRK3Q16288 839 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 VPS52Q8N1B4 723 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 SLC22A17Q8WUG5 538 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 BCL7CQ8WUZ0 217 aaPredicted RBP15.34■□□□□ 0.05
LINC00028-201ENST00000435497 SLC5A5Q92911 643 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 PHKBQ93100 1093 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 ZBP1Q9H171 429 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 UNC45AQ9H3U1 944 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 DACT1Q9NYF0 836 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 LIMD1Q9UGP4 676 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 TCEAL9Q9UHQ7 104 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 IRAK3Q9Y616 596 aa15.34■□□□□ 0.05
LINC00028-201ENST00000435497 IGKV6-21A0A0C4DH24 114 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 CCDC196A0A1B0GTZ2 297 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 TMEM150BA6NC51 233 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 MEIS3P2A8K0S8 358 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 PHKA2P46019 1235 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 TBC1D8BQ0IIM8 1120 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 KRT32Q14532 448 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 LONRF3Q496Y0 759 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 BMP2KLQ5H9B9 411 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 Q6ZUG5 572 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 ASCL5Q7RTU5 278 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 ZDHHC14Q8IZN3 488 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 CCDC12Q8WUD4 166 aaPredicted RBP15.33■□□□□ 0.04
LINC00028-201ENST00000435497 NLRP7Q8WX94 980 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 LPPQ93052 612 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 TMEM169Q96HH4 297 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 CCDC136Q96JN2 1154 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 RIT2Q99578 217 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 TRAIPQ9BWF2 469 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 MRPL9Q9BYD2 267 aaKnown RBP15.33■□□□□ 0.04
LINC00028-201ENST00000435497 NIFKQ9BYG3 293 aaKnown RBP15.33■□□□□ 0.04
LINC00028-201ENST00000435497 NRDE2Q9H7Z3 1164 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 CHST12Q9NRB3 414 aa15.33■□□□□ 0.04
LINC00028-201ENST00000435497 A0A087WZ62 844 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 CHMP2AO43633 222 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 PSMD10O75832 226 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 GALTP07902 379 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 CTSAP10619 480 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 CA8P35219 290 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 USP11P51784 963 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 ATAT1Q5SQI0 421 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 KIAA1841Q6NSI8 718 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 B3GNT9Q6UX72 402 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 DDX53Q86TM3 631 aaKnown RBP15.32■□□□□ 0.04
LINC00028-201ENST00000435497 KCNB2Q92953 911 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 BRF1Q92994 677 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 IGSF21Q96ID5 467 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 SCLT1Q96NL6 688 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 SH2D3AQ9BRG2 576 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 FDXACB1Q9BRP7 624 aaPredicted RBP15.32■□□□□ 0.04
LINC00028-201ENST00000435497 VN1R3Q9BXE9 311 aa15.32■□□□□ 0.04
LINC00028-201ENST00000435497 GCOM2Q9BZD3 368 aaPredicted RBP15.32■□□□□ 0.04
LINC00028-201ENST00000435497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.31■□□□□ 0.04
LINC00028-201ENST00000435497 B4GALT3O60512 393 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 GAS7O60861 476 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 ZC3H11AO75152 810 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC00028-201ENST00000435497 OFD1O75665 1012 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 HMGB1P09429 215 aaKnown RBP15.31■□□□□ 0.04
LINC00028-201ENST00000435497 SFNP31947 248 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 JAK3P52333 1124 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 POLGP54098 1239 aaPredicted RBP15.31■□□□□ 0.04
LINC00028-201ENST00000435497 MTERF2Q49AM1 385 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 ASTLQ6HA08 431 aaPredicted RBP15.31■□□□□ 0.04
LINC00028-201ENST00000435497 TEKT3Q9BXF9 490 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 TBC1D13Q9NVG8 400 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 DZANK1Q9NVP4 752 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 VPS54Q9P1Q0 977 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 DNAJB4Q9UDY4 337 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 USTQ9Y2C2 406 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 NID2Q14112 1375 aa15.31■□□□□ 0.04
LINC00028-201ENST00000435497 ZNF623O75123 536 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 NBL1P41271 181 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 FGD1P98174 961 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 CDC42EP1Q00587 391 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 BMS1Q14692 1282 aaKnown RBP15.3■□□□□ 0.04
LINC00028-201ENST00000435497 XKR3Q5GH77 459 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 NOMO2Q5JPE7 1267 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 LRCH2Q5VUJ6 765 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 TMC5Q6UXY8 1006 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 ZNF280BQ86YH2 543 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 KSR1Q8IVT5 923 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 PLCD3Q8N3E9 789 aa15.3■□□□□ 0.04
LINC00028-201ENST00000435497 TDRD5Q8NAT2 981 aaKnown RBP15.3■□□□□ 0.04
LINC00028-201ENST00000435497 BICD2Q8TD16 824 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms