RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 A0A087WWV3 80 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 ARHGEF35A5YM69 484 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 EPOPA6NHQ4 379 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 USO1O60763 962 aaKnown RBP18.08■□□□□ 0.48
SMPD4-207ENST00000435455 CSDE1O75534 798 aaKnown RBP18.08■□□□□ 0.48
SMPD4-207ENST00000435455 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 POU3F3P20264 500 aaPredicted RBP18.08■□□□□ 0.48
SMPD4-207ENST00000435455 FGFR4P22455 802 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 PHKA2P46019 1235 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 TFDP1Q14186 410 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 BTG3Q14201 252 aaPredicted RBP18.08■□□□□ 0.48
SMPD4-207ENST00000435455 CATSPER4Q7RTX7 472 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
SMPD4-207ENST00000435455 C17orf80Q9BSJ5 609 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 ELAC1Q9H777 363 aaKnown RBP18.08■□□□□ 0.48
SMPD4-207ENST00000435455 FOXD4L1Q9NU39 408 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 TMEM161AQ9NX61 479 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 RWDD3Q9Y3V2 267 aa18.08■□□□□ 0.48
SMPD4-207ENST00000435455 PRRC2BQ5JSZ5 2229 aaKnown RBP18.08■□□□□ 0.48
SMPD4-207ENST00000435455 RFXAPO00287 272 aa18.07■□□□□ 0.48
SMPD4-207ENST00000435455 IBSPP21815 317 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-207ENST00000435455 POU5F1BQ06416 359 aa18.07■□□□□ 0.48
SMPD4-207ENST00000435455 GRB10Q13322 594 aa18.07■□□□□ 0.48
SMPD4-207ENST00000435455 IL17AQ16552 155 aa18.07■□□□□ 0.48
SMPD4-207ENST00000435455 TMEM192Q8IY95 271 aa18.07■□□□□ 0.48
SMPD4-207ENST00000435455 RNF149Q8NC42 400 aa18.07■□□□□ 0.48
SMPD4-207ENST00000435455 FNDC1Q4ZHG4 1894 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-207ENST00000435455 EYSQ5T1H1 3165 aa18.07■□□□□ 0.48
SMPD4-207ENST00000435455 HOXA2O43364 376 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
SMPD4-207ENST00000435455 ARL2P36404 184 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 PCBP1Q15365 356 aaKnown RBP eCLIP18.06■□□□□ 0.489e-6■■□□□ 13.3
SMPD4-207ENST00000435455 EPC2Q52LR7 807 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 ECHDC2Q86YB7 292 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 GDPD5Q8WTR4 605 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 CLP1Q92989 425 aaKnown RBP18.06■□□□□ 0.48
SMPD4-207ENST00000435455 POLR3FQ9H1D9 316 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-207ENST00000435455 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
SMPD4-207ENST00000435455 LMCD1Q9NZU5 365 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 KIAA1024Q9UPX6 916 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 DNM3Q9UQ16 869 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 PIN4Q9Y237 131 aaKnown RBP18.06■□□□□ 0.48
SMPD4-207ENST00000435455 PRUNE2Q8WUY3 3088 aa18.06■□□□□ 0.48
SMPD4-207ENST00000435455 A0A0U1RQF3 1178 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 VWA3AA6NCI4 1184 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 PP2D1A8MPX8 630 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 STX6O43752 255 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 RB1P06400 928 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 SKIP12755 728 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 PTENP60484 403 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 RESTQ13127 1097 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 ECM1Q16610 540 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 PADI6Q6TGC4 694 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 IFNLR1Q8IU57 520 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-207ENST00000435455 KCTD17Q8N5Z5 321 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 AK8Q96MA6 479 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 TRAIPQ9BWF2 469 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 MINDY3Q9H8M7 445 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 MTCH2Q9Y6C9 303 aa18.05■□□□□ 0.48
SMPD4-207ENST00000435455 LPXNO60711 386 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 EOMESO95936 686 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 PDIA4P13667 645 aaKnown RBP18.04■□□□□ 0.48
SMPD4-207ENST00000435455 CYP11B2P19099 503 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 CTNNB1P35222 781 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 BMPR1AP36894 532 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 CAPSQ13938 189 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 PAN2Q504Q3 1202 aaKnown RBP18.04■□□□□ 0.48
SMPD4-207ENST00000435455 TWF2Q6IBS0 349 aaKnown RBP18.04■□□□□ 0.48
SMPD4-207ENST00000435455 ASAP3Q8TDY4 903 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 MMTAG2Q9BU76 263 aaKnown RBP18.04■□□□□ 0.48
SMPD4-207ENST00000435455 NFKBIZQ9BYH8 718 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 NT5C3AQ9H0P0 336 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 BHMT2Q9H2M3 363 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 ZSCAN16Q9H4T2 348 aaPredicted RBP18.04■□□□□ 0.48
SMPD4-207ENST00000435455 AGPAT5Q9NUQ2 364 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 MTMR6Q9Y217 621 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 KIAA1671Q9BY89 1806 aa18.04■□□□□ 0.48
SMPD4-207ENST00000435455 TBKBP1A7MCY6 615 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 C5orf67F2Z3F1 127 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 H3BNC9 293 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 SLC26A4O43511 780 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 ERLIN2O94905 339 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 EYA4O95677 639 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 GLRA2P23416 452 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 CDC25AP30304 524 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 RAB27AP51159 221 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 NCBP1Q09161 790 aaKnown RBP18.03■□□□□ 0.48
SMPD4-207ENST00000435455 GPM6BQ13491 265 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 SF3A1Q15459 793 aaKnown RBP18.03■□□□□ 0.48
SMPD4-207ENST00000435455 HYIQ5T013 277 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 FAM102BQ5T8I3 360 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 MAEAQ7L5Y9 396 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 MICALL1Q8N3F8 863 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 CDK5RAP3Q96JB5 506 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 C11orf84Q9BUA3 381 aaPredicted RBP18.03■□□□□ 0.48
SMPD4-207ENST00000435455 PLVAPQ9BX97 442 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 TMEM117Q9H0C3 514 aa18.03■□□□□ 0.48
SMPD4-207ENST00000435455 MRPL42Q9Y6G3 142 aaKnown RBP18.03■□□□□ 0.48
SMPD4-207ENST00000435455 LRRIQ4A6NIV6 560 aa18.02■□□□□ 0.48
SMPD4-207ENST00000435455 INO80B-WBP1J3KQ70 363 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms