RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CTTNBP2NLQ9P2B4 639 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 ASAP1Q9ULH1 1129 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 CHKBQ9Y259 395 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 LRCH1Q9Y2L9 728 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 MED1Q15648 1581 aaPredicted RBP8.02□□□□□ -1.13
CPSF6-202ENST00000435070 PFASO15067 1338 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 A0A1W2PRG0 241 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 RIPK2O43353 540 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 PDE8BO95263 885 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 FAM200BP0CF97 657 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 KCNA6P17658 529 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 SCYL3Q8IZE3 742 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 BLOC1S6Q9UL45 172 aa8.02□□□□□ -1.13
CPSF6-202ENST00000435070 TJP3O95049 919 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 FOXN2P32314 431 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 VHLP40337 213 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 PPFIBP2Q8ND30 876 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CYTH2Q99418 400 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 C7orf25Q9BPX7 421 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 FGFBP2Q9BYJ0 223 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 TXLNGYQ9BZA5 131 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 DCTN4Q9UJW0 460 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CALML3P27482 149 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 FKBP3Q00688 224 aaKnown RBP8.01□□□□□ -1.13
CPSF6-202ENST00000435070 PDIA5Q14554 519 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 KYNUQ16719 465 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 P3H1Q32P28 736 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CNPY1Q3B7I2 92 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 HS2ST1Q7LGA3 356 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 AGGF1Q8N302 714 aaeCLIP8.01□□□□□ -1.133e-8■□□□□ 9.1
CPSF6-202ENST00000435070 KCNH5Q8NCM2 988 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CKAP2Q8WWK9 683 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 HIC2Q96JB3 615 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 VCX3BQ9H321 246 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 VCX3AQ9NNX9 186 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CCDC87Q9NVE4 849 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 NALCNQ8IZF0 1738 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 KDM3BQ7LBC6 1761 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 USP17L12C9JPN9 530 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 USP17L21D6R901 530 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 GFPT2O94808 682 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 GOLGA8HP0CJ92 632 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 IMPDH2P12268 514 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 RASSF2P50749 326 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 NEK3P51956 506 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 GALCP54803 685 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 PFKFB3Q16875 520 aaPredicted RBP8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CFAP157Q5JU67 520 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 PRUNE1Q86TP1 453 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 TRIM42Q8IWZ5 723 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 ATL2Q8NHH9 583 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 SEPT8Q92599 483 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 GJA10Q969M2 543 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 NMD3Q96D46 503 aaKnown RBP8.01□□□□□ -1.13
CPSF6-202ENST00000435070 DNAJC1Q96KC8 554 aaKnown RBP8.01□□□□□ -1.13
CPSF6-202ENST00000435070 OR52Z1P0C646 297 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 ABCD1P33897 745 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 POU5F1Q01860 360 aaKnown RBP8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CYP4X1Q8N118 509 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 DDX12PQ92771 950 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 RASAL2Q9UJF2 1139 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 MKL2Q9ULH7 1088 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 WDR91A4D1P6 747 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 POTEMA6NI47 508 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 GNA14O95837 355 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 YY1P25490 414 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 INHBCP55103 352 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 BPIFB4P59827 614 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 KCNH2Q12809 1159 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 KPNB1Q14974 876 aaKnown RBP8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CAPN12Q6ZSI9 719 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 ZNF365Q70YC5 407 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 ADGRA1Q86SQ6 560 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 IFNL2Q8IZJ0 200 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 MYOCDQ8IZQ8 938 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 NRG4Q8WWG1 115 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 CCDC134Q9H6E4 229 aa8.01□□□□□ -1.13
CPSF6-202ENST00000435070 DMAP1Q9NPF5 467 aaPredicted RBP8.01□□□□□ -1.13
CPSF6-202ENST00000435070 A6NJR5 290 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 TSPY2A6NKD2 308 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 O00370 1275 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 BAG2O95816 211 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 UQCRFS1P1P0C7P4 283 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 PTENP60484 403 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 LRRC36Q1X8D7 754 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 GLYCTKQ8IVS8 523 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 DCLRE1BQ9H816 532 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 PCDHA4Q9UN74 947 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 PCDHGA4Q9Y5G9 962 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 ECM29Q5VYK3 1845 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 CCDC160A6NGH7 325 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 IRS4O14654 1257 aaPredicted RBP8□□□□□ -1.13
CPSF6-202ENST00000435070 CCNB1P14635 433 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 MAPK7Q13164 816 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 DCAF12L1Q5VU92 463 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 GUF1Q8N442 669 aaKnown RBP8□□□□□ -1.13
CPSF6-202ENST00000435070 TTC16Q8NEE8 873 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 ALG3Q92685 438 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 FAM136AQ96C01 138 aa8□□□□□ -1.13
CPSF6-202ENST00000435070 SLC7A6OSQ96CW6 309 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms