RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 SLAIN2Q9P270 581 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 RPTORQ8N122 1335 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 EP400Q96L91 3159 aa11.32□□□□□ -0.6
SCAF4-203ENST00000434667 H0Y3Z8 333 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 NUGGCQ68CJ6 796 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 JAMLQ86YT9 394 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 CCDC26Q8TAB7 109 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 PBKQ96KB5 322 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 RMDN2Q96LZ7 410 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 RIC8AQ9NPQ8 531 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 RGL1Q9NZL6 768 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 STK17AQ9UEE5 414 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 AMFRQ9UKV5 643 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 ZMYND8Q9ULU4 1186 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 TISP43B9A030 160 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 UBAP1LF5GYI3 381 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 GCNT3O95395 438 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 XRCC5P13010 732 aaKnown RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 NMT1P30419 496 aaKnown RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 PLCB4Q15147 1175 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 CCDC6Q16204 474 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 TMEM119Q4V9L6 283 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 C2CD6Q53TS8 623 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 TLCD1Q96CP7 247 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 ZBTB10Q96DT7 871 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 TMEM237Q96Q45 408 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 RUSC1Q9BVN2 902 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 SIX2Q9NPC8 291 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 ZDHHC18Q9NUE0 388 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 SAMD15Q9P1V8 674 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 CLGNO14967 610 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 CHMP2AO43633 222 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 RTN2O75298 545 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 RARAP10276 462 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 AKR1B1P15121 316 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 CYP2J2P51589 502 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 NCALDP61601 193 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 POU5F1Q01860 360 aaKnown RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 KLRC3Q07444 240 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 MPP2Q14168 576 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 PRR16Q569H4 304 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 DPP8Q6V1X1 898 aaPredicted RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 BZW1Q7L1Q6 419 aaKnown RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 AMIGO3Q86WK7 504 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
SCAF4-203ENST00000434667 STXBP5LQ9Y2K9 1186 aa11.31□□□□□ -0.6
SCAF4-203ENST00000434667 G3V3G9 751 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 AFPP02771 609 aaKnown RBP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 MTM1Q13496 603 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 MESDQ14696 234 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 AGBL2Q5U5Z8 902 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 NEK9Q8TD19 979 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 FBF1Q8TES7 1133 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 DDX3YO15523 660 aaKnown RBP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 UBXN2AP68543 259 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 ADGRF4Q8IZF3 695 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 ERP44Q9BS26 406 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 NKX1-2Q9UD57 310 aaPredicted RBP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 FLOT1O75955 427 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 PDHA1P08559 390 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 DRAP1Q14919 205 aaPredicted RBP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 CBWD6Q4V339 395 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 CBWD3Q5JTY5 395 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 CBWD5Q5RIA9 395 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 THEMIS2Q5TEJ8 643 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 ANKS4BQ8N8V4 417 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 C1orf54Q8WWF1 131 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 ATG4AQ8WYN0 398 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 KAT5Q92993 513 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 KLHL29Q96CT2 875 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 ATP6V0A4Q9HBG4 840 aa11.3□□□□□ -0.6
SCAF4-203ENST00000434667 ZBTB12Q9Y330 459 aaPredicted RBP11.3□□□□□ -0.6
SCAF4-203ENST00000434667 PCP11498 1178 aaKnown RBP11.29□□□□□ -0.6
SCAF4-203ENST00000434667 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
SCAF4-203ENST00000434667 USH1GQ495M9 461 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 EXOC3L1Q86VI1 746 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 CATSPER3Q86XQ3 398 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 FITM2Q8N6M3 262 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 C15orf41Q9Y2V0 281 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 KIAA0391O15091 583 aaKnown RBP11.29□□□□□ -0.6
SCAF4-203ENST00000434667 PPFIA2O75334 1257 aa11.29□□□□□ -0.6
SCAF4-203ENST00000434667 DNAJC8O75937 253 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms