RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 TNFAIP2Q03169 654 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 CCL14Q16627 93 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 MAP4K3Q8IVH8 894 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 CCDC112Q8NEF3 446 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 IKZF4Q9H2S9 585 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 METTL14Q9HCE5 456 aaKnown RBP11.6□□□□□ -0.55
NEFM-202ENST00000433454 ZNF215Q9UL58 517 aaPredicted RBP11.6□□□□□ -0.55
NEFM-202ENST00000433454 FAM184BQ9ULE4 1060 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 TBX20Q9UMR3 447 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.6□□□□□ -0.55
NEFM-202ENST00000433454 GYPCP04921 128 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 SKILP12757 684 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 CYP2C19P33261 490 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 ARL2P36404 184 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 LACTBP83111 547 aaPredicted RBP11.6□□□□□ -0.55
NEFM-202ENST00000433454 CCZ1BP86790 482 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 CCZ1P86791 482 aaPredicted RBP11.6□□□□□ -0.55
NEFM-202ENST00000433454 MYBPC2Q14324 1141 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 CNGA4Q8IV77 575 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 SLC9A9Q8IVB4 645 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 ERGIC2Q96RQ1 377 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 JPH2Q9BR39 696 aaPredicted RBP11.6□□□□□ -0.55
NEFM-202ENST00000433454 MKNK1Q9BUB5 465 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 PYCARDQ9ULZ3 195 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 FRMD4BQ9Y2L6 1034 aa11.6□□□□□ -0.55
NEFM-202ENST00000433454 ZBTB42B2RXF5 422 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 AKR1B15C9JRZ8 316 aaPredicted RBP11.59□□□□□ -0.55
NEFM-202ENST00000433454 ZNF286BP0CG31 522 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 HOXD8P13378 290 aaPredicted RBP11.59□□□□□ -0.55
NEFM-202ENST00000433454 CTGFP29279 349 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 PSMC2P35998 433 aaKnown RBP11.59□□□□□ -0.55
NEFM-202ENST00000433454 NAMPTP43490 491 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 PSMC4P43686 418 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 CYP2J2P51589 502 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 PPP2R3AQ06190 1150 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 RBL2Q08999 1139 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 SYCP1Q15431 976 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 TC2NQ8N9U0 490 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 TMEM174Q8WUU8 243 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 ARHGAP28Q9P2N2 729 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 ADGRA3Q8IWK6 1321 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 ADCY6O43306 1168 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 MFAP3LO75121 409 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 MMP3P08254 477 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 ZNF865P0CJ78 1059 aaPredicted RBP11.59□□□□□ -0.55
NEFM-202ENST00000433454 XRCC5P13010 732 aaKnown RBP11.59□□□□□ -0.55
NEFM-202ENST00000433454 GLRA2P23416 452 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 CASP4P49662 377 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 DGKDQ16760 1214 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 C12orf56Q8IXR9 622 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 FAM186BQ8IYM0 893 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
NEFM-202ENST00000433454 KIAA1524Q8TCG1 905 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 ASAP3Q8TDY4 903 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 PCMTD1Q96MG8 357 aaPredicted RBP11.59□□□□□ -0.55
NEFM-202ENST00000433454 ZSWIM8A7E2V4 1837 aa11.59□□□□□ -0.55
NEFM-202ENST00000433454 LRRIQ4A6NIV6 560 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 ZNF500O60304 480 aaPredicted RBP11.58□□□□□ -0.56
NEFM-202ENST00000433454 EXOC3O60645 756 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 TRIM21P19474 475 aaKnown RBP11.58□□□□□ -0.56
NEFM-202ENST00000433454 CASP14P31944 242 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 ADKP55263 362 aaKnown RBP11.58□□□□□ -0.56
NEFM-202ENST00000433454 GOLGA8FQ08AF8 430 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 GOLGA8DPQ0D2H9 430 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 IER5Q5VY09 327 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 DEPTORQ8TB45 409 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 CPLX3Q8WVH0 158 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 KCNN1Q92952 543 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 IQCDQ96DY2 449 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 NUP58Q9BVL2 599 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 IGKV6-21A0A0C4DH24 114 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 IGHA2P01877 340 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 YY1P25490 414 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 DCAF17Q5H9S7 520 aaPredicted RBP11.58□□□□□ -0.56
NEFM-202ENST00000433454 ZNF484Q5JVG2 852 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 TLK2Q86UE8 772 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 PSPC1Q8WXF1 523 aaKnown RBP11.58□□□□□ -0.56
NEFM-202ENST00000433454 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 PANX2Q96RD6 677 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 C16orf70Q9BSU1 422 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 ARHGAP39Q9C0H5 1083 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 RNPEPQ9H4A4 650 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 SUGCTQ9HAC7 445 aa11.58□□□□□ -0.56
NEFM-202ENST00000433454 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
NEFM-202ENST00000433454 COL1A2P08123 1366 aa11.57□□□□□ -0.56
NEFM-202ENST00000433454 SIP14410 1827 aa11.57□□□□□ -0.56
NEFM-202ENST00000433454 H3BRB1 525 aa11.57□□□□□ -0.56
NEFM-202ENST00000433454 HNRNPDLO14979 420 aaKnown RBP11.57□□□□□ -0.56
NEFM-202ENST00000433454 FXR1P51114 621 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEFM-202ENST00000433454 STRN3Q13033 797 aa11.57□□□□□ -0.56
NEFM-202ENST00000433454 MXD4Q14582 209 aaPredicted RBP11.57□□□□□ -0.56
NEFM-202ENST00000433454 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
NEFM-202ENST00000433454 CBWD1Q9BRT8 395 aa11.57□□□□□ -0.56
NEFM-202ENST00000433454 TUT1Q9H6E5 874 aaKnown RBP11.57□□□□□ -0.56
NEFM-202ENST00000433454 CASP8AP2Q9UKL3 1982 aa11.57□□□□□ -0.56
NEFM-202ENST00000433454 A6NJR5 290 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms