RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 UCHL3P15374 230 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 PSMC5P62195 406 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 ITGB3BPQ13352 177 aaPredicted RBP14.02□□□□□ -0.16
DDX56-204ENST00000431640 SLC18A3Q16572 532 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.16
DDX56-204ENST00000431640 IFNL1Q8IU54 200 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 SYCP3Q8IZU3 236 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 IL31RAQ8NI17 732 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 CCDC102AQ96A19 550 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 SLC35C1Q96A29 364 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 GPRASP2Q96D09 838 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 CCDC43Q96MW1 224 aaKnown RBP14.02□□□□□ -0.16
DDX56-204ENST00000431640 NOX5Q96PH1 765 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 SPAG5Q96R06 1193 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 ZNF446Q9NWS9 450 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 HOXC10Q9NYD6 342 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 RAB21Q9UL25 225 aa14.02□□□□□ -0.16
DDX56-204ENST00000431640 WDR64B1ANS9 1081 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 ENC1O14682 589 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 TLR2O60603 784 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 STAM2O75886 525 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
DDX56-204ENST00000431640 EIF2AK2P19525 551 aaKnown RBP14.01□□□□□ -0.17
DDX56-204ENST00000431640 SLC9A1P19634 815 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 CASP4P49662 377 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 GFPT1Q06210 699 aaPredicted RBP14.01□□□□□ -0.17
DDX56-204ENST00000431640 ZC2HC1CQ53FD0 456 aaPredicted RBP14.01□□□□□ -0.17
DDX56-204ENST00000431640 DCAF17Q5H9S7 520 aaPredicted RBP14.01□□□□□ -0.17
DDX56-204ENST00000431640 CC2D1AQ6P1N0 951 aaPredicted RBP14.01□□□□□ -0.17
DDX56-204ENST00000431640 NSMFQ6X4W1 530 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 VPS36Q86VN1 386 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 VSIG10LQ86VR7 867 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 DRC1Q96MC2 740 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 ACCSQ96QU6 501 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 TEX13BQ9BXU2 312 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 ST6GALNAC4Q9H4F1 302 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 POLD4Q9HCU8 107 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 AGPAT3Q9NRZ7 376 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 RNF146Q9NTX7 359 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 TFR2Q9UP52 801 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 DUSP10Q9Y6W6 482 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 PLXNB2O15031 1838 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 ZMYM2Q9UBW7 1377 aa14.01□□□□□ -0.17
DDX56-204ENST00000431640 PPP1R37O75864 691 aa14□□□□□ -0.17
DDX56-204ENST00000431640 CCDC172P0C7W6 258 aa14□□□□□ -0.17
DDX56-204ENST00000431640 PLS3P13797 630 aa14□□□□□ -0.17
DDX56-204ENST00000431640 TCP1P17987 556 aaKnown RBP14□□□□□ -0.17
DDX56-204ENST00000431640 OSBPP22059 807 aa14□□□□□ -0.17
DDX56-204ENST00000431640 YWHABP31946 246 aaKnown RBP14□□□□□ -0.17
DDX56-204ENST00000431640 PRKCIP41743 596 aa14□□□□□ -0.17
DDX56-204ENST00000431640 RARRES1P49788 294 aa14□□□□□ -0.17
DDX56-204ENST00000431640 KCNA1Q09470 495 aa14□□□□□ -0.17
DDX56-204ENST00000431640 DEFB115Q30KQ5 88 aa14□□□□□ -0.17
DDX56-204ENST00000431640 ZNF746Q6NUN9 644 aaPredicted RBP14□□□□□ -0.17
DDX56-204ENST00000431640 DPY19L2P1Q6NXN4 242 aa14□□□□□ -0.17
DDX56-204ENST00000431640 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
DDX56-204ENST00000431640 SMAP1Q8IYB5 467 aaPredicted RBP14□□□□□ -0.17
DDX56-204ENST00000431640 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
DDX56-204ENST00000431640 VTI1AQ96AJ9 217 aa14□□□□□ -0.17
DDX56-204ENST00000431640 CDHR1Q96JP9 859 aa14□□□□□ -0.17
DDX56-204ENST00000431640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14□□□□□ -0.17
DDX56-204ENST00000431640 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
DDX56-204ENST00000431640 SPATC1LQ9H0A9 340 aa14□□□□□ -0.17
DDX56-204ENST00000431640 PORCNQ9H237 461 aa14□□□□□ -0.17
DDX56-204ENST00000431640 PKD2L1Q9P0L9 805 aa14□□□□□ -0.17
DDX56-204ENST00000431640 SNX12Q9UMY4 172 aa14□□□□□ -0.17
DDX56-204ENST00000431640 FHOD1Q9Y613 1164 aa14□□□□□ -0.17
DDX56-204ENST00000431640 CEP350Q5VT06 3117 aa14□□□□□ -0.17
DDX56-204ENST00000431640 ATP8B3O60423 1300 aa14□□□□□ -0.17
DDX56-204ENST00000431640 BTNL10A8MVZ5 291 aa14□□□□□ -0.17
DDX56-204ENST00000431640 GFPT2O94808 682 aa14□□□□□ -0.17
DDX56-204ENST00000431640 NR3C2P08235 984 aa14□□□□□ -0.17
DDX56-204ENST00000431640 PNMA6AP0CW24 399 aaPredicted RBP14□□□□□ -0.17
DDX56-204ENST00000431640 FERP16591 822 aa14□□□□□ -0.17
DDX56-204ENST00000431640 VEGFBP49765 207 aa14□□□□□ -0.17
DDX56-204ENST00000431640 ITIH3Q06033 890 aa14□□□□□ -0.17
DDX56-204ENST00000431640 MAPK7Q13164 816 aa14□□□□□ -0.17
DDX56-204ENST00000431640 BAATQ14032 418 aaPredicted RBP14□□□□□ -0.17
DDX56-204ENST00000431640 PLS1Q14651 629 aa14□□□□□ -0.17
DDX56-204ENST00000431640 NAB2Q15742 525 aa14□□□□□ -0.17
DDX56-204ENST00000431640 IFI16Q16666 785 aaKnown RBP14□□□□□ -0.17
DDX56-204ENST00000431640 CCDC70Q6NSX1 233 aa14□□□□□ -0.17
DDX56-204ENST00000431640 IRF2BP2Q7Z5L9 587 aa14□□□□□ -0.17
DDX56-204ENST00000431640 RIOX2Q8IUF8 465 aa14□□□□□ -0.17
DDX56-204ENST00000431640 C12orf56Q8IXR9 622 aa14□□□□□ -0.17
DDX56-204ENST00000431640 ANKRD13CQ8N6S4 541 aa14□□□□□ -0.17
DDX56-204ENST00000431640 FAM133AQ8N9E0 248 aa14□□□□□ -0.17
DDX56-204ENST00000431640 ANKZF1Q9H8Y5 726 aa14□□□□□ -0.17
DDX56-204ENST00000431640 HDAC6Q9UBN7 1215 aa14□□□□□ -0.17
DDX56-204ENST00000431640 RNF14Q9UBS8 474 aa14□□□□□ -0.17
DDX56-204ENST00000431640 PNMA3Q9UL41 463 aa14□□□□□ -0.17
DDX56-204ENST00000431640 K7ENM7 598 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 MAPK13O15264 365 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 EXOC3O60645 756 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 MOCS3O95396 460 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 KRT13P13646 458 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 STAT1P42224 750 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 TM4SF4P48230 202 aa13.99□□□□□ -0.17
DDX56-204ENST00000431640 FMO5P49326 533 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms