RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 INO80BQ9C086 356 aaPredicted RBP12.32□□□□□ -0.44
SPTLC3-202ENST00000431275 SCAND2PQ9GZW5 306 aaPredicted RBP12.32□□□□□ -0.44
SPTLC3-202ENST00000431275 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
SPTLC3-202ENST00000431275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 ATP2A2P16615 1042 aaKnown RBP12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 FGFR4P22455 802 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 PTENP60484 403 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 DEFB103AP81534 67 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 POU5F1BQ06416 359 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 CAPSQ13938 189 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 TFDP1Q14186 410 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 DHX8Q14562 1220 aaKnown RBP12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 MCM6Q14566 821 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 ARSHQ5FYA8 562 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 FAM109BQ6ICB4 259 aaPredicted RBP12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 CCDC73Q6ZRK6 1079 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 SRGAP1Q7Z6B7 1085 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 PHOSPHO2Q8TCD6 241 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 LARP4BQ92615 738 aaKnown RBP12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 KIFAP3Q92845 792 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 SLC9A7Q96T83 725 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 FTHL17Q9BXU8 183 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 STK17AQ9UEE5 414 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 SIP14410 1827 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 ARID2Q68CP9 1835 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 TET1Q8NFU7 2136 aa12.31□□□□□ -0.44
SPTLC3-202ENST00000431275 CEP290O15078 2479 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 A0A087X0B3 334 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 GRXCR1A8MXD5 290 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 MGEA5O60502 916 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 HIP1RO75146 1068 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 AMHP03971 560 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 PHKA2P46019 1235 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 RAD51AP2Q09MP3 1159 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 RESP18Q5W5W9 173 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 ADALQ6DHV7 355 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 GPBP1Q86WP2 473 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 DAW1Q8N136 415 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 PDILTQ8N807 584 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 LINC01599Q8WXQ3 324 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 BSNDQ8WZ55 320 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 TIPINQ9BVW5 301 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 MINDY3Q9H8M7 445 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 GDPD2Q9HCC8 539 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 KCND2Q9NZV8 630 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 CHMP5Q9NZZ3 219 aa12.3□□□□□ -0.44
SPTLC3-202ENST00000431275 NPHP3-ACAD11A0A0J9YXS1 232 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 DENND3A2RUS2 1198 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 LRRIQ4A6NIV6 560 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 SFI1A8K8P3 1242 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 SOX1O00570 391 aaPredicted RBP12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 SFPQP23246 707 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 STAT6P42226 847 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 MAPK7Q13164 816 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 DSC3Q14574 896 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 PPP2R5AQ15172 486 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 SV2BQ7L1I2 683 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 CATSPER4Q7RTX7 472 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 TMCO2Q7Z6W1 182 aaPredicted RBP12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 HERC6Q8IVU3 1022 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 MYOCDQ8IZQ8 938 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 TOP1MTQ969P6 601 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 IFT74Q96LB3 600 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 DRC1Q96MC2 740 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 IPO9Q96P70 1041 aaKnown RBP12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 ADAM2Q99965 735 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 NFKBIZQ9BYH8 718 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 RGS18Q9NS28 235 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 FAM13BQ9NYF5 915 aa12.29□□□□□ -0.44
SPTLC3-202ENST00000431275 INO80B-WBP1J3KQ70 363 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 UPP2O95045 317 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 ZSCAN20P17040 1043 aaPredicted RBP12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 CMA1P23946 247 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 NAMPTP43490 491 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 RABGGTBP53611 331 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 PEX3P56589 373 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 MBTD1Q05BQ5 628 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 GIT2Q14161 759 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 E2F4Q16254 413 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 DEPTORQ8TB45 409 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 C17orf75Q9HAS0 396 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 CHST12Q9NRB3 414 aa12.28□□□□□ -0.44
SPTLC3-202ENST00000431275 A0A1B0GVL5 298 aa12.27□□□□□ -0.45
SPTLC3-202ENST00000431275 CCDC169A6NNP5 214 aa12.27□□□□□ -0.45
SPTLC3-202ENST00000431275 POLR2DO15514 142 aaKnown RBP12.27□□□□□ -0.45
SPTLC3-202ENST00000431275 GJB5O95377 273 aa12.27□□□□□ -0.45
SPTLC3-202ENST00000431275 KRT18P05783 430 aaKnown RBP12.27□□□□□ -0.45
SPTLC3-202ENST00000431275 PBX2P40425 430 aa12.27□□□□□ -0.45
SPTLC3-202ENST00000431275 NPTX2P47972 431 aa12.27□□□□□ -0.45
SPTLC3-202ENST00000431275 FAM189BP81408 668 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms