RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 COASYQ13057 564 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
CHD4-202ENST00000430771 PNOCQ13519 176 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 CAPSQ13938 189 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 TRIM71Q2Q1W2 868 aaKnown RBP12.16□□□□□ -0.46
CHD4-202ENST00000430771 ODR4Q5SWX8 454 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 STXBP4Q6ZWJ1 553 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 FAM178BQ8IXR5 827 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 DAW1Q8N136 415 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 MYCT1Q8N699 235 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 ASAP3Q8TDY4 903 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 SPIRE2Q8WWL2 714 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 PRPF31Q8WWY3 499 aaKnown RBP12.16□□□□□ -0.46
CHD4-202ENST00000430771 NLRP7Q8WX94 980 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 DHX38Q92620 1227 aaKnown RBP12.16□□□□□ -0.46
CHD4-202ENST00000430771 SMARCE1Q969G3 411 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 HIPK3Q9H422 1215 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 PRDM5Q9NQX1 630 aaPredicted RBP12.16□□□□□ -0.46
CHD4-202ENST00000430771 OLFML3Q9NRN5 406 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 TMEM39AQ9NV64 488 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 TBX21Q9UL17 535 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 CDY2AQ9Y6F7 541 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 TRAK2O60296 914 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 PARNO95453 639 aaKnown RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 RPN1P04843 607 aaKnown RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 MAPTP10636 758 aaKnown RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 CKBP12277 381 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 SELPP16109 830 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 PEX3P56589 373 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 NLRP11P59045 1033 aaKnown RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 POU5F1BQ06416 359 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 TMEM62Q0P6H9 643 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 ALCAMQ13740 583 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 KCNB1Q14721 858 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 FAM26FQ5R3K3 315 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 CDCA2Q69YH5 1023 aaPredicted RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 LRRC8DQ7L1W4 858 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 SFR1Q86XK3 245 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 BSNDQ8WZ55 320 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 WNT8BQ93098 351 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 GSDMAQ96QA5 445 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 NFKBIZQ9BYH8 718 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 GCOM2Q9BZD3 368 aaPredicted RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 GTPBP4Q9BZE4 634 aaKnown RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 INO80BQ9C086 356 aaPredicted RBP12.15□□□□□ -0.46
CHD4-202ENST00000430771 KMT5AQ9NQR1 393 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 GINS2Q9Y248 185 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 LTBP2Q14767 1821 aa12.15□□□□□ -0.46
CHD4-202ENST00000430771 UBE4BO95155 1302 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 KIAA0355O15063 1070 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 EVI5O60447 810 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHD4-202ENST00000430771 CASP1P29466 404 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 NPTX2P47972 431 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 CRYBB1P53674 252 aaPredicted RBP12.14□□□□□ -0.47
CHD4-202ENST00000430771 NCKAP1LP55160 1127 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 MGAT3Q09327 533 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 PCBP1Q15365 356 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHD4-202ENST00000430771 CAMK4Q16566 473 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 KMT5BQ4FZB7 885 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 FAM26DQ5JW98 314 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
CHD4-202ENST00000430771 SRGAP1Q7Z6B7 1085 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
CHD4-202ENST00000430771 C7orf61Q8IZ16 206 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 HVCN1Q96D96 273 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 OSMRQ99650 979 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 CELF4Q9BZC1 486 aaKnown RBP12.14□□□□□ -0.47
CHD4-202ENST00000430771 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
CHD4-202ENST00000430771 SQORQ9Y6N5 450 aa12.14□□□□□ -0.47
CHD4-202ENST00000430771 A0A087WZ62 844 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 KLRC4O43908 158 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 GPR32O75388 356 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 KIF20AO95235 890 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 GCNT3O95395 438 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 RAG1P15918 1043 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 RFC2P35250 354 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 EFNA5P52803 228 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 PTENP60484 403 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 MDM2Q00987 491 aaPredicted RBP12.13□□□□□ -0.47
CHD4-202ENST00000430771 PSMD2Q13200 908 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 ZNF618Q5T7W0 954 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 NT5DC1Q5TFE4 455 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 KSR1Q8IVT5 923 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 TRIML1Q8N9V2 468 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 USP38Q8NB14 1042 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 KCNN1Q92952 543 aa12.13□□□□□ -0.47
CHD4-202ENST00000430771 FDXACB1Q9BRP7 624 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms