RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 IRS1P35568 1242 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 TRAPPC10P48553 1259 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 TTC38Q5R3I4 469 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 LRRC55Q6ZSA7 311 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 RHPN2Q8IUC4 686 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 TMEM143Q96AN5 459 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 C11orf84Q9BUA3 381 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 CWH43Q9H720 699 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 TYW1Q9NV66 732 aaKnown RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 NOL7Q9UMY1 257 aaKnown RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 H3BQ06 376 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 SLITRK3O94933 977 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 ATF7P17544 494 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 MCM7P33993 719 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 ZNF174Q15697 407 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 CALCRLQ16602 461 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 AAK1Q2M2I8 961 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 ODR4Q5SWX8 454 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 FOXD4L5Q5VV16 416 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 BRAPQ7Z569 592 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 ADGRD2Q7Z7M1 963 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 ECHDC2Q86YB7 292 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 FOXD4L4Q8WXT5 416 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 CEP170P1Q96L14 293 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 MTMR9Q96QG7 549 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 EIF2AK1Q9BQI3 630 aaKnown RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 NSUN3Q9H649 340 aaKnown RBP18.93■□□□□ 0.62
UBE3D-204ENST00000430071 TMEM161AQ9NX61 479 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 RWDD3Q9Y3V2 267 aa18.93■□□□□ 0.62
UBE3D-204ENST00000430071 TDRD15B5MCY1 1934 aaKnown RBP18.92■□□□□ 0.62
UBE3D-204ENST00000430071 BAG4O95429 457 aaKnown RBP18.92■□□□□ 0.62
UBE3D-204ENST00000430071 ZSCAN22P10073 491 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-204ENST00000430071 LTBRP36941 435 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 TXKP42681 527 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 DLX2Q07687 328 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-204ENST00000430071 HYAL1Q12794 435 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 TRIP11Q15643 1979 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 TIGD5Q53EQ6 642 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 FAM173BQ6P4H8 233 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 TPH2Q8IWU9 490 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 C4orf19Q8IY42 314 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 RNF169Q8NCN4 708 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 NLRP4Q96MN2 994 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 CASD1Q96PB1 797 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 PLVAPQ9BX97 442 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 DHX33Q9H6R0 707 aaKnown RBP18.92■□□□□ 0.62
UBE3D-204ENST00000430071 TTC12Q9H892 705 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-204ENST00000430071 MINDY3Q9H8M7 445 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 ATP6V0A4Q9HBG4 840 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 CD320Q9NPF0 282 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 PCDHB6Q9Y5E3 794 aa18.92■□□□□ 0.62
UBE3D-204ENST00000430071 POTEMA6NI47 508 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 LINC01565O15544 149 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 NEMFO60524 1076 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 ZSCAN20P17040 1043 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-204ENST00000430071 YWHABP31946 246 aaKnown RBP18.91■□□□□ 0.62
UBE3D-204ENST00000430071 DDIT3P35638 169 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 PBX3P40426 434 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 RILPL1Q5EBL4 403 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 XKR9Q5GH70 373 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 CLLU1OSQ5K130 101 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 EP400NLQ6ZTU2 488 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 SLFN12Q8IYM2 578 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 POF1BQ8WVV4 589 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 PRPF31Q8WWY3 499 aaKnown RBP18.91■□□□□ 0.62
UBE3D-204ENST00000430071 P2RX5Q93086 422 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 GCOM2Q9BZD3 368 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-204ENST00000430071 ELAC1Q9H777 363 aaKnown RBP18.91■□□□□ 0.62
UBE3D-204ENST00000430071 IFT122Q9HBG6 1241 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 XPNPEP1Q9NQW7 623 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 PCDHA12Q9UN75 941 aa18.91■□□□□ 0.62
UBE3D-204ENST00000430071 MEIS3P2A8K0S8 358 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 PDIA4P13667 645 aaKnown RBP18.9■□□□□ 0.62
UBE3D-204ENST00000430071 IL9P15248 144 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 DNM2P50570 870 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 COL19A1Q14993 1142 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 SPOUT1Q5T280 376 aaKnown RBP18.9■□□□□ 0.62
UBE3D-204ENST00000430071 ZNF598Q86UK7 904 aaKnown RBP18.9■□□□□ 0.62
UBE3D-204ENST00000430071 COLGALT1Q8NBJ5 622 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 KHSRPQ92945 711 aaKnown RBP eCLIP18.9■□□□□ 0.626e-7■■■□□ 17.2
UBE3D-204ENST00000430071 HSD17B14Q9BPX1 270 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 LMAN2LQ9H0V9 348 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 IGFLR1Q9H665 355 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 ZDHHC9Q9Y397 364 aa18.9■□□□□ 0.62
UBE3D-204ENST00000430071 SRGAP2CP0DJJ0 459 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 ORC2Q13416 577 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-204ENST00000430071 LEXMQ3ZCV2 418 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 C4orf32Q8N8J7 132 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 NEK9Q8TD19 979 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 HELQQ8TDG4 1101 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 LPPQ93052 612 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 PABPC5Q96DU9 382 aaKnown RBP18.89■□□□□ 0.61
UBE3D-204ENST00000430071 ZSCAN16Q9H4T2 348 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-204ENST00000430071 ZSWIM4Q9H7M6 989 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.89■□□□□ 0.61
UBE3D-204ENST00000430071 CLDND1Q9NY35 253 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 COL4A3BPQ9Y5P4 624 aa18.89■□□□□ 0.61
UBE3D-204ENST00000430071 A0A0U1RQF3 1178 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms