RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 TBX4P57082 545 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 TOP3AQ13472 1001 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 LRRC32Q14392 662 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZNF568Q3ZCX4 644 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 CT47A1Q5JQC4 288 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 MIIPQ5JXC2 388 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 KANK2Q63ZY3 851 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 SLFN12LQ6IEE8 588 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 OTOP2Q7RTS6 562 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 RALYLQ86SE5 291 aaKnown RBP3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 PHYKPLQ8IUZ5 450 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 AMER2Q8N7J2 671 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 SMC1BQ8NDV3 1235 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 CHTF18Q8WVB6 975 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 MBD6Q96DN6 1003 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 MAML3Q96JK9 1138 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 GPR101Q96P66 508 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 CARD11Q9BXL7 1154 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 KATNBL1Q9H079 304 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 CSRNP2Q9H175 543 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 IKZF4Q9H2S9 585 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 USP36Q9P275 1121 aaKnown RBP3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 RIPOR2Q9Y4F9 1068 aa3.99□□□□□ -1.77
HMGB1P9-201ENST00000429856 WASHC2CQ9Y4E1 1318 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 A0A0G2JNJ9 132 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZEB2O60315 1214 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 EIF5BO60841 1220 aaKnown RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 FKBP9O95302 570 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 HMGCRP04035 888 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 PTX3P26022 381 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 LSP1P33241 339 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 NANOS3P60323 173 aaKnown RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 PHC1P78364 1004 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 EXOSC10Q01780 885 aaKnown RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 SLC6A3Q01959 620 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 USP10Q14694 798 aaKnown RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 NRN1LQ496H8 165 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZMAT1Q5H9K5 638 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 TMEM200BQ69YZ2 307 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 GRAMD4Q6IC98 578 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 TIGD7Q6NT04 549 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 LRSAM1Q6UWE0 723 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 FKBP9P1Q75LS8 142 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 DNAJC10Q8IXB1 793 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 C7orf31Q8N865 590 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 RPGRQ92834 1020 aaKnown RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 TUBGCP5Q96RT8 1024 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 TTC1Q99614 292 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 ASPSCR1Q9BZE9 553 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 TRIM8Q9BZR9 551 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZDHHC5Q9C0B5 715 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 IFT22Q9H7X7 185 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 H2AFY2Q9P0M6 372 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 Q9UFV3 132 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 APOBEC2Q9Y235 224 aaKnown RBP3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZDHHC9Q9Y397 364 aa3.98□□□□□ -1.77
HMGB1P9-201ENST00000429856 BRINP1O60477 761 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ULK1O75385 1050 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ALDH1L1O75891 902 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZNF202O95125 648 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 BPIP17213 487 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 CSF2RBP32927 897 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ADCY8P40145 1251 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ADCYAP1R1P41586 468 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 INHBCP55103 352 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 BCAR1P56945 870 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 SMAD3P84022 425 aaKnown RBP3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 CD83Q01151 205 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 MOGSQ13724 837 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 EIF4HQ15056 248 aaKnown RBP3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 TTF1Q15361 905 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 PRAMEF9Q5VWM5 478 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ESRP1Q6NXG1 681 aaKnown RBP3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 RNF207Q6ZRF8 634 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 CCDC146Q8IYE0 955 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZNF610Q8N9Z0 462 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZNF503Q96F45 646 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 PTPN18Q99952 460 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 CCDC8Q9H0W5 538 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 ZMAT4Q9H898 229 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 EMC7Q9NPA0 242 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 SPTLC3Q9NUV7 552 aa3.97□□□□□ -1.77
HMGB1P9-201ENST00000429856 A0A087X1B8 175 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 LOC102724159A0A0B4J2E5 919 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 SHTN1A0MZ66 631 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 TPD52L2O43399 206 aaKnown RBP3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 TGM5O43548 720 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 TSPAN6O43657 245 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 SCGB1D2O95969 90 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 MEOX1P50221 254 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 KCNQ1P51787 676 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 GUCY2FP51841 1108 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 SESN2P58004 480 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 MCL1Q07820 350 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 MTMR1Q13613 665 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 PWP2Q15269 919 aaKnown RBP3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 NFE2Q16621 373 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 DGKDQ16760 1214 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 ATP13A4Q4VNC1 1196 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 ESPNLQ6ZVH7 1005 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms