RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 POLR3FQ9H1D9 316 aaPredicted RBP16.56■□□□□ 0.24
GARNL3-204ENST00000429629 C2orf40Q9H1Z8 148 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 CHST12Q9NRB3 414 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 PADI3Q9ULW8 664 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 A0A087WZ62 844 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 MYL1P05976 194 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 SRGAP2CP0DJJ0 459 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 GHRP10912 638 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 PFKFB1P16118 471 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 ABCD1P33897 745 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 EFNA5P52803 228 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 MAPK7Q13164 816 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 GIT2Q14161 759 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 CDCA2Q69YH5 1023 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 ZNF365Q70YC5 407 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 GPBP1Q86WP2 473 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 DAW1Q8N136 415 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 PDILTQ8N807 584 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 RNF149Q8NC42 400 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 PHOSPHO2Q8TCD6 241 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 ASAP3Q8TDY4 903 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 OSMRQ99650 979 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 FDXACB1Q9BRP7 624 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 AGO3Q9H9G7 860 aaKnown RBP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 GDPD2Q9HCC8 539 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 ERVK-5Q9HDB9 667 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 LARSQ9P2J5 1176 aaKnown RBP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 NOC2LQ9Y3T9 749 aaKnown RBP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 MYH9P35579 1960 aaKnown RBP16.55■□□□□ 0.24
GARNL3-204ENST00000429629 ALPK3Q96L96 1907 aa16.55■□□□□ 0.24
GARNL3-204ENST00000429629 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 H0YCG3 227 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 HIP1RO75146 1068 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 PLS3P13797 630 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 SFPQP23246 707 aaKnown RBP eCLIP16.54■□□□□ 0.24
GARNL3-204ENST00000429629 SYKP43405 635 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 PAK2Q13177 524 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 CAPSQ13938 189 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 FAM187BQ17R55 369 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 DEFB128Q7Z7B8 93 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 KSR1Q8IVT5 923 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 TMEM40Q8WWA1 233 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 DHX58Q96C10 678 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 TRAIPQ9BWF2 469 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 TMEM134Q9H6X4 195 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 GPRC5CQ9NQ84 441 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 SEL1LQ9UBV2 794 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 ST3GAL5Q9UNP4 418 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 GINS2Q9Y248 185 aa16.54■□□□□ 0.24
GARNL3-204ENST00000429629 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 ACRP10323 421 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 MAPTP10636 758 aaKnown RBP16.53■□□□□ 0.24
GARNL3-204ENST00000429629 AXLP30530 894 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 NDUFA8P51970 172 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 SMTNP53814 917 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 NCBP1Q09161 790 aaKnown RBP16.53■□□□□ 0.24
GARNL3-204ENST00000429629 KANK3Q6NY19 840 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 MAEAQ7L5Y9 396 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 FAM228AQ86W67 206 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 ELOA2Q8IYF1 753 aaPredicted RBP16.53■□□□□ 0.24
GARNL3-204ENST00000429629 CEP57L1Q8IYX8 460 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 TDHQ8IZJ6 230 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 FSIP1Q8NA03 581 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 DDX12PQ92771 950 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 CCDC34Q96HJ3 373 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 PRIMPOLQ96LW4 560 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 SCLT1Q96NL6 688 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 REEP2Q9BRK0 252 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 OSBPL7Q9BZF2 842 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 FZD8Q9H461 694 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 PARVGQ9HBI0 331 aa16.53■□□□□ 0.24
GARNL3-204ENST00000429629 FRMD3A2A2Y4 597 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 MYMKA6NI61 221 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 KRT18P05783 430 aaKnown RBP16.52■□□□□ 0.24
GARNL3-204ENST00000429629 GAP43P17677 238 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 CD52P31358 61 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 NPTX2P47972 431 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 DMP1Q13316 513 aaPredicted RBP16.52■□□□□ 0.24
GARNL3-204ENST00000429629 SHHQ15465 462 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 ZBTB8OSQ8IWT0 167 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 ENGASEQ8NFI3 743 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 TIGD1Q96MW7 591 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 TRIM9Q9C026 710 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.24
GARNL3-204ENST00000429629 ST6GALNAC4Q9H4F1 302 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 ARHGAP28Q9P2N2 729 aa16.52■□□□□ 0.24
GARNL3-204ENST00000429629 CEP290O15078 2479 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 PVALEFA0A1B0GWK0 134 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 ENPP3O14638 875 aa16.51■□□□□ 0.23
GARNL3-204ENST00000429629 ACTN4O43707 911 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms