RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 GTF2H1P32780 548 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 AFDNP55196 1824 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MAP3K10Q02779 954 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MECOMQ03112 1051 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 AIMP1Q12904 312 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 PTK7Q13308 1070 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MSLNQ13421 630 aaPredicted RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 KCNJ12Q14500 433 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 CHADLQ6NUI6 762 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 C4orf50Q6ZRC1 276 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 STOX1Q6ZVD7 989 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 WDR75Q8IWA0 830 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 PLEKHO2Q8TD55 490 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 MS4A14Q96JA4 679 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 CCDC42Q96M95 316 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 DDX50Q9BQ39 737 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 IFIH1Q9BYX4 1025 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 TTYH3Q9C0H2 523 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 TRPC7Q9HCX4 862 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 TAB2Q9NYJ8 693 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 RWDD2AQ9UIY3 292 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 GIT1Q9Y2X7 761 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 PCDHA13Q9Y5I0 950 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 NUMBLQ9Y6R0 609 aa9.53□□□□□ -0.88
CDC42BPA-206ENST00000429440 CPDO75976 1380 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 UMODL1Q5DID0 1318 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 SPATA31A3Q5VYP0 1347 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 NEURL1BA8MQ27 555 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 GOLGA8TH3BQL2 631 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 SPTLC1O15269 473 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 GOLGA8HP0CJ92 632 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 PTPREP23469 700 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 CNGA2Q16280 664 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 KLHDC7AQ5VTJ3 777 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 PHLDB2Q86SQ0 1253 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 VPS37DQ86XT2 251 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 STK11IPQ8N1F8 1099 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 USP38Q8NB14 1042 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 ZNF507Q8TCN5 953 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 XAGE3Q8WTP9 111 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 EAF2Q96CJ1 260 aaPredicted RBP9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 NMD3Q96D46 503 aaKnown RBP9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 INPP4AQ96PE3 977 aaPredicted RBP9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 TANGO6Q9C0B7 1094 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 MLXIPQ9HAP2 919 aa9.52□□□□□ -0.88
CDC42BPA-206ENST00000429440 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZNF263O14978 683 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 MTRF1O75570 445 aaKnown RBP9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 TATP17735 454 aaPredicted RBP9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 IARSP41252 1262 aaKnown RBP9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 CYP27A1Q02318 531 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 RNASELQ05823 741 aaKnown RBP9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 GRM2Q14416 872 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 KHDC1Q4VXA5 237 aaKnown RBP9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 PARP10Q53GL7 1025 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 FAM133AQ8N9E0 248 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 PIP4K2CQ8TBX8 421 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 SEC14L1Q92503 715 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 NOX5Q96PH1 765 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 PSMB7Q99436 277 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 UBAC1Q9BSL1 405 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 TMEM109Q9BVC6 243 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 TXLNGYQ9BZA5 131 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 CCDC68Q9H2F9 335 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 FGFR1OP2Q9NVK5 253 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 UBR2Q8IWV8 1755 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 SHANK3Q9BYB0 1731 aa9.52□□□□□ -0.89
CDC42BPA-206ENST00000429440 SOCS7O14512 581 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 HNRNPH3P31942 346 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 CSE1LP55060 971 aaKnown RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 PLCB3Q01970 1234 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 SF3A3Q12874 501 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 GCKRQ14397 625 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 HSP90AA5PQ58FG0 334 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 TNFAIP8L3Q5GJ75 292 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 FIGNQ5HY92 759 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 COPS6Q7L5N1 327 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 TAOK1Q7L7X3 1001 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZNF804AQ7Z570 1209 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 IFNL2Q8IZJ0 200 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 SLC7A6OSQ96CW6 309 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 SEC31BQ9NQW1 1179 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 PAG1Q9NWQ8 432 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 HOXC10Q9NYD6 342 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 STXBP5LQ9Y2K9 1186 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 COL15A1P39059 1388 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 PNPLA7Q6ZV29 1317 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 A0A1W2PQJ5 194 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 DYTNA2CJ06 578 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 TTC34A8MYJ7 566 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 TCP11X1B4DZS4 312 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 CAPN9O14815 690 aa9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 RGS16O15492 202 aaPredicted RBP9.51□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZBED1O96006 694 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms