RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.64□□□□□ -0.23
LDB3-205ENST00000429277 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 MTBPQ96DY7 904 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 FTOQ9C0B1 505 aaKnown RBP eCLIP13.64□□□□□ -0.23
LDB3-205ENST00000429277 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 MBD5Q9P267 1494 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 COPS2P61201 443 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
LDB3-205ENST00000429277 KIF19Q2TAC6 998 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 FASTKD5Q7L8L6 764 aaKnown RBP13.64□□□□□ -0.23
LDB3-205ENST00000429277 SEPT12Q8IYM1 358 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 GANCQ8TET4 914 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 POLR3CQ9BUI4 534 aaPredicted RBP13.64□□□□□ -0.23
LDB3-205ENST00000429277 TEKT2Q9UIF3 430 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 TPX2Q9ULW0 747 aaKnown RBP13.64□□□□□ -0.23
LDB3-205ENST00000429277 MARK3P27448 753 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 RAD51Q06609 339 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 COASYQ13057 564 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 FAM83BQ5T0W9 1011 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 SNX19Q92543 992 aa13.64□□□□□ -0.23
LDB3-205ENST00000429277 SPATS2LQ9NUQ6 558 aaKnown RBP13.64□□□□□ -0.23
LDB3-205ENST00000429277 ZNF335Q9H4Z2 1342 aaPredicted RBP13.63□□□□□ -0.23
LDB3-205ENST00000429277 OVOS2A0A0G2JMS6 1433 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 OVOS2A0A0J9YW53 1432 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 OVOS2Q6IE36 1432 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 VAMP7P51809 220 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 EFNA5P52803 228 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 ADCY1Q08828 1119 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 TWF2Q6IBS0 349 aaKnown RBP13.63□□□□□ -0.23
LDB3-205ENST00000429277 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 L3MBTL1Q9Y468 752 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 KIF1BO60333 1816 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 PALMO75781 387 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 PYGLP06737 847 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 CLCN6P51797 869 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 TMCO4Q5TGY1 634 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 SNRNP48Q6IEG0 339 aaKnown RBP13.63□□□□□ -0.23
LDB3-205ENST00000429277 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 GUCY2CP25092 1073 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 KCNH2Q12809 1159 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 FAM133BQ5BKY9 247 aaKnown RBP13.63□□□□□ -0.23
LDB3-205ENST00000429277 EFHC2Q5JST6 749 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 CENPKQ9BS16 269 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 ACAD9Q9H845 621 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 NFU1Q9UMS0 254 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 MINPP1Q9UNW1 487 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 ASB14A6NK59 587 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 ACSL3O95573 720 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 BFARQ9NZS9 450 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 PLAAQ9Y263 795 aa13.63□□□□□ -0.23
LDB3-205ENST00000429277 A0A1W2PQC6 194 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 DENND3A2RUS2 1198 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 CFLARO15519 480 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 ORC4O43929 436 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 ATP6V1E1P36543 226 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 DDX50Q9BQ39 737 aaKnown RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 ABCB6Q9NP58 842 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 GDAQ9Y2T3 454 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 COL15A1P39059 1388 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 PRAMEF22A3QJZ6 481 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 RASA4BC9J798 803 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 RASA4O43374 803 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 STILQ15468 1287 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 HEATR6Q6AI08 1181 aaKnown RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 TMEM270Q6UE05 265 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 RHOT1Q8IXI2 618 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 CEP19Q96LK0 163 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 H3BRJ5 948 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 DPYSL4O14531 572 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 EEF1DP29692 281 aaKnown RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 HIBCHQ6NVY1 386 aaPredicted RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 ZNF564Q8TBZ8 553 aaPredicted RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 TRIM54Q9BYV2 358 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 FNDC3AQ9Y2H6 1198 aaKnown RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 MMEP08473 750 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 SLFNL1Q499Z3 407 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 ULK4Q96C45 1275 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 HINFPQ9BQA5 517 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 DCP1AQ9NPI6 582 aaPredicted RBP13.62□□□□□ -0.23
LDB3-205ENST00000429277 SPATA31A3Q5VYP0 1347 aa13.62□□□□□ -0.23
LDB3-205ENST00000429277 MORF4L2Q15014 288 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 SAMD9LQ8IVG5 1584 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 HNRNPCL2B2RXH8 293 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 HNRNPCL1O60812 293 aaKnown RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 LARGE1O95461 756 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 PTK2BQ14289 1009 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 CDC26Q8NHZ8 85 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.61□□□□□ -0.23
LDB3-205ENST00000429277 WRNIP1Q96S55 665 aa13.61□□□□□ -0.23
LDB3-205ENST00000429277 NOP53Q9NZM5 478 aaKnown RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 MAGED2Q9UNF1 606 aaPredicted RBP13.61□□□□□ -0.23
LDB3-205ENST00000429277 ZHX2Q9Y6X8 837 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms