RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 PRR16Q569H4 304 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 EARS2Q5JPH6 523 aaKnown RBP12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 KRT25Q7Z3Z0 450 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 RTN4RL1Q86UN2 441 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 NME8Q8N427 588 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 COLGALT1Q8NBJ5 622 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 APOL5Q9BWW9 433 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 TCEAL9Q9UHQ7 104 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 NR2E1Q9Y466 385 aa12.22□□□□□ -0.45
APOBEC3C-202ENST00000428892 ZDBF2Q9HCK1 2354 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 KDM3AQ9Y4C1 1321 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 USP34Q70CQ2 3546 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 GPR182O15218 404 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 MSH4O15457 936 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 TDP2O95551 362 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 AVPR2P30518 371 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 SLC26A2P50443 739 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 RBM10P98175 930 aaKnown RBP12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 NR5A1Q13285 461 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 NONOQ15233 471 aaKnown RBP eCLIP12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 ABHD15Q6UXT9 468 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 FAM43BQ6ZT52 329 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 PLPPR4Q7Z2D5 763 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 ABI1Q8IZP0 508 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 SLC5A5Q92911 643 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 ADAM2Q99965 735 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 TCF25Q9BQ70 676 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 ATP6V0A4Q9HBG4 840 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 TBC1D22BQ9NU19 505 aa12.21□□□□□ -0.45
APOBEC3C-202ENST00000428892 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 H0Y858 1186 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 DDX39AO00148 427 aaKnown RBP12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 KRT2P35908 639 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 ERVFC1P60507 584 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 KRT17Q04695 432 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 MTMR3Q13615 1198 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 INF2Q27J81 1249 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 CES5AQ6NT32 575 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 ZNF746Q6NUN9 644 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 ANKRD54Q6NXT1 300 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 B3GNT9Q6UX72 402 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 SLC24A5Q71RS6 500 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 CKAP2LQ8IYA6 745 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 TMEM87AQ8NBN3 555 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 ETNPPLQ8TBG4 499 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 PPP1R16BQ96T49 567 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 TMX1Q9H3N1 280 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 RGS18Q9NS28 235 aa12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
APOBEC3C-202ENST00000428892 CCDC194A0A1B0GVG4 234 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 BTBD18B2RXH4 712 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 HOXA2O43364 376 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 SLC37A4O43826 429 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 HBP1O60381 514 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 KLRC1P26715 233 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 PPM1AP35813 382 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 MCM2P49736 904 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 BMS1Q14692 1282 aaKnown RBP12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 FAM102BQ5T8I3 360 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 TMC7Q7Z402 723 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 CCDC60Q8IWA6 550 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 DIS3L2Q8IYB7 885 aaKnown RBP12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 ATP8B4Q8TF62 1192 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 SUSD6Q92537 303 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 CASP10Q92851 521 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 ASIC4Q96FT7 647 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 RIPOR3Q96MK2 946 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 RIT2Q99578 217 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 MFSD1Q9H3U5 465 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 ERVK-5Q9HDB9 667 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 KCNMB3Q9NPA1 279 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 TMEM161AQ9NX61 479 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 ST3GAL5Q9UNP4 418 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 NOC2LQ9Y3T9 749 aaKnown RBP12.19□□□□□ -0.46
APOBEC3C-202ENST00000428892 COL1A2P08123 1366 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 MGEA5O60502 916 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 PSMD10O75832 226 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 FGFR1P11362 822 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 HOXB8P17481 243 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 FOXK2Q01167 660 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 PIK3AP1Q6ZUJ8 805 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 SMAP1Q8IYB5 467 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 UBALD2Q8IYN6 164 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 LRRC43Q8N309 656 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 METTL13Q8N6R0 699 aa12.18□□□□□ -0.46
APOBEC3C-202ENST00000428892 KREMEN2Q8NCW0 462 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms