RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 MLXIPQ9HAP2 919 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 JPH1Q9HDC5 661 aaPredicted RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 TBC1D22BQ9NU19 505 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 LRWD1Q9UFC0 647 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 ARID2Q68CP9 1835 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 EML1O00423 815 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 OPA1O60313 960 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 MYCP01106 439 aaPredicted RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 CYBAP13498 195 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 GRK4P32298 578 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 GGCXP38435 758 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 CLNS1AP54105 237 aaKnown RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 PRMT2P55345 433 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 GNGT1P63211 74 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 TNFAIP2Q03169 654 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 RBBP5Q15291 538 aaKnown RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 SNCBQ16143 134 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 CALR3Q96L12 384 aaKnown RBP12.47□□□□□ -0.41
CECR3-201ENST00000428828 ZSWIM4Q9H7M6 989 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 SLC9A2Q9UBY0 812 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 PTPN22Q9Y2R2 807 aa12.47□□□□□ -0.41
CECR3-201ENST00000428828 NFASCO94856 1347 aa12.46□□□□□ -0.41
CECR3-201ENST00000428828 GOLGA6L7A0A1B0GV03 622 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 A0A1B0GVL5 298 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.42
CECR3-201ENST00000428828 ZNF202O95125 648 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 CCNE2O96020 404 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 IGHA2P01877 340 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 INHAP05111 366 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 TGFB3P10600 412 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.42
CECR3-201ENST00000428828 LONP1P36776 959 aaKnown RBP12.46□□□□□ -0.42
CECR3-201ENST00000428828 CYP4A11Q02928 519 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 PDCD2Q16342 344 aaPredicted RBP12.46□□□□□ -0.42
CECR3-201ENST00000428828 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 PXYLP1Q8TE99 480 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 SNX29Q8TEQ0 813 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 PLIN2Q99541 437 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 SENP7Q9BQF6 1050 aa12.46□□□□□ -0.42
CECR3-201ENST00000428828 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.42
CECR3-201ENST00000428828 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 AKR1B15C9JRZ8 316 aaPredicted RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 NOP56O00567 594 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 NDUFAB1O14561 156 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 ZNF18P17022 549 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 CCNHP51946 323 aaPredicted RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 KRT76Q01546 638 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 PPP2R5CQ13362 524 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 FILIP1LQ4L180 1135 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 ZC3H12AQ5D1E8 599 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 CELF3Q5SZQ8 465 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 CDCA2Q69YH5 1023 aaPredicted RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 FAM43BQ6ZT52 329 aaPredicted RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 PDILTQ8N807 584 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 C1orf131Q8NDD1 294 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 OR6J1Q8NGC5 347 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 SPATA33Q96N06 139 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 DDX20Q9UHI6 824 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 MYO6Q9UM54 1294 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 BRCA2P51587 3418 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 GOLGA6BA6NDN3 693 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 GH1P01241 217 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 MYBL2P10244 700 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 AKR1A1P14550 325 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 PFKFB1P16118 471 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 UBA7P41226 1012 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 ACTR2P61160 394 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 DUSP28Q4G0W2 176 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 ZNF569Q5MCW4 686 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 RESP18Q5W5W9 173 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 KRT79Q5XKE5 535 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 TTC19Q6DKK2 380 aaPredicted RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 IQSEC1Q6DN90 963 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 METTL7BQ6UX53 244 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 TRMT1LQ7Z2T5 733 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 CTU1Q7Z7A3 348 aaKnown RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 CABP7Q86V35 215 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 GIMAP8Q8ND71 665 aaPredicted RBP12.45□□□□□ -0.42
CECR3-201ENST00000428828 P3H4Q92791 437 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 SLC24A3Q9HC58 644 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 DISC1Q9NRI5 854 aa12.45□□□□□ -0.42
CECR3-201ENST00000428828 KAT6AQ92794 2004 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 WDR64B1ANS9 1081 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 SNUPNO95149 360 aaKnown RBP12.44□□□□□ -0.42
CECR3-201ENST00000428828 CCT6AP40227 531 aaKnown RBP12.44□□□□□ -0.42
CECR3-201ENST00000428828 NAP1L1P55209 391 aaKnown RBP12.44□□□□□ -0.42
CECR3-201ENST00000428828 ARHGAP1Q07960 439 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
CECR3-201ENST00000428828 PDIA5Q14554 519 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 ALS2CLQ60I27 953 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 TLK2Q86UE8 772 aa12.44□□□□□ -0.42
CECR3-201ENST00000428828 PARP9Q8IXQ6 854 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms