RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 ANHXE9PGG2 379 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 CCNE2O96020 404 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
DDX39B-209ENST00000428450 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-209ENST00000428450 UBE2SQ16763 222 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 ANKRD45Q5TZF3 282 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 CCDC60Q8IWA6 550 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-209ENST00000428450 ATRIPQ8WXE1 791 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 DDX23Q9BUQ8 820 aaKnown RBP13.11□□□□□ -0.31
DDX39B-209ENST00000428450 NRDE2Q9H7Z3 1164 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 RCAN3Q9UKA8 241 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 PCDHA6Q9UN73 950 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 MTF2Q9Y483 593 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-209ENST00000428450 PCDHA8Q9Y5H6 950 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 CLUHO75153 1309 aa13.11□□□□□ -0.31
DDX39B-209ENST00000428450 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 PAPLNO95428 1278 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 LAMP2P13473 410 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 NLRP11P59045 1033 aaKnown RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 HTR4Q13639 388 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 CWC27Q6UX04 472 aaKnown RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 STAMQ92783 540 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 RILPL2Q969X0 211 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 SPZ1Q9BXG8 430 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 AGO4Q9HCK5 861 aaKnown RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 SPATA6Q9NWH7 488 aaPredicted RBP13.1□□□□□ -0.31
DDX39B-209ENST00000428450 ZSCAN32Q9NX65 697 aa13.1□□□□□ -0.31
DDX39B-209ENST00000428450 KANSL1LA0AUZ9 987 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 SLC30A4O14863 429 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 BACH1O14867 736 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 IFIT3O14879 490 aaKnown RBP13.09□□□□□ -0.31
DDX39B-209ENST00000428450 B4GALT3O60512 393 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 SLC11A1P49279 550 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 CLCN3P51790 818 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 METTL13Q8N6R0 699 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 LINC01465Q8N7H1 131 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
DDX39B-209ENST00000428450 ZNF707Q96C28 371 aaPredicted RBP13.09□□□□□ -0.31
DDX39B-209ENST00000428450 SHDQ96IW2 340 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 RPP25Q9BUL9 199 aaKnown RBP13.09□□□□□ -0.31
DDX39B-209ENST00000428450 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 MAN1C1Q9NR34 630 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 TBC1D13Q9NVG8 400 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 DNAJB4Q9UDY4 337 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 NUMBLQ9Y6R0 609 aa13.09□□□□□ -0.31
DDX39B-209ENST00000428450 COL4A3Q01955 1670 aa13.08□□□□□ -0.31
DDX39B-209ENST00000428450 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 INPPL1O15357 1258 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 RFPL2O75678 378 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 SSBP05455 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX39B-209ENST00000428450 FGFR4P22455 802 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 SMARCA1P28370 1054 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 GPC5P78333 572 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 SNW1Q13573 536 aaKnown RBP13.08□□□□□ -0.32
DDX39B-209ENST00000428450 FAM160B1Q5W0V3 765 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 SWSAP1Q6NVH7 229 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-209ENST00000428450 RSPH1Q8WYR4 309 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 ZNF668Q96K58 619 aaPredicted RBP13.08□□□□□ -0.32
DDX39B-209ENST00000428450 OSBPL6Q9BZF3 934 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 ZNF302Q9NR11 478 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX39B-209ENST00000428450 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.08□□□□□ -0.32
DDX39B-209ENST00000428450 PATJQ8NI35 1801 aa13.08□□□□□ -0.32
DDX39B-209ENST00000428450 MIA3Q5JRA6 1907 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 MEIS3P2A8K0S8 358 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 MEIS1O00470 390 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 DARSP14868 501 aaKnown RBP13.07□□□□□ -0.32
DDX39B-209ENST00000428450 PHKA2P46019 1235 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 CEP55Q53EZ4 464 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 NETO1Q8TDF5 533 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 SMG7Q92540 1137 aaKnown RBP13.07□□□□□ -0.32
DDX39B-209ENST00000428450 LPPQ93052 612 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 TRAIPQ9BWF2 469 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
DDX39B-209ENST00000428450 DACT1Q9NYF0 836 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
DDX39B-209ENST00000428450 AKT3Q9Y243 479 aa13.07□□□□□ -0.32
DDX39B-209ENST00000428450 MAFBQ9Y5Q3 323 aaPredicted RBP13.07□□□□□ -0.32
DDX39B-209ENST00000428450 FAM170BA6NMN3 283 aa13.06□□□□□ -0.32
DDX39B-209ENST00000428450 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
DDX39B-209ENST00000428450 TEX28O15482 410 aa13.06□□□□□ -0.32
DDX39B-209ENST00000428450 DHX15O43143 795 aaKnown RBP13.06□□□□□ -0.32
DDX39B-209ENST00000428450 OFD1O75665 1012 aa13.06□□□□□ -0.32
DDX39B-209ENST00000428450 MYBP10242 640 aa13.06□□□□□ -0.32
DDX39B-209ENST00000428450 GPC3P51654 580 aa13.06□□□□□ -0.32
DDX39B-209ENST00000428450 SPEM2Q0P670 501 aa13.06□□□□□ -0.32
DDX39B-209ENST00000428450 ACAP1Q15027 740 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms