RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 IFT88Q13099 833 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 RABL6Q3YEC7 729 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 EFCAB13Q8IY85 973 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 CEP120Q8N960 986 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TMEM35BQ8NCS4 154 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.48□□□□□ -1.056e-14■□□□□ 9.9
CTNND1-207ENST00000426142 MIPOL1Q8TD10 442 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 KIF12Q96FN5 646 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 FMO2Q99518 471 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 GCOM2Q9BZD3 368 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 KIAA1586Q9HCI6 787 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 JPH1Q9HDC5 661 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 RBAKQ9NYW8 714 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 BAG5Q9UL15 447 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 SLC8A2Q9UPR5 921 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TJP3O95049 919 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NT5C2P49902 561 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 STX1BP61266 288 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 APBA1Q02410 837 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 CACNB2Q08289 660 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TMEM62Q0P6H9 643 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NNTQ13423 1086 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 DRAP1Q14919 205 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 FASTKD5Q7L8L6 764 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 LRRC43Q8N309 656 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 RNF149Q8NC42 400 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TTC1Q99614 292 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 ZMYND12Q9H0C1 365 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 OLA1Q9NTK5 396 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 KLHL8Q9P2G9 620 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 RFX7Q2KHR2 1363 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 IQCA1LA6NCM1 817 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NVLO15381 856 aaKnown RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TEX33O43247 280 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 NSUN2Q08J23 767 aaKnown RBP eCLIP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 BAATQ14032 418 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 HP1BP3Q5SSJ5 553 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TMEM143Q96AN5 459 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 PLA2G12BQ9BX93 195 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TMEM39BQ9GZU3 492 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 SAYSD1Q9NPB0 183 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 GGA3Q9NZ52 723 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 TTC7AQ9ULT0 858 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 PACSIN2Q9UNF0 486 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-207ENST00000426142 PCDHA10Q9Y5I2 948 aa8.48□□□□□ -1.05
CTNND1-207ENST00000426142 PVALEFA0A1B0GWK0 134 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 SUN1O94901 812 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 CTSHP09668 335 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 KRT10P13645 584 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 GPC5P78333 572 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF449Q6P9G9 518 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 PROM2Q8N271 834 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 ELMOD1Q8N336 334 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 RAET1EQ8TD07 263 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 THOC1Q96FV9 657 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 C2orf40Q9H1Z8 148 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 SNX24Q9Y343 169 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 EMSYQ7Z589 1322 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 RASGRF2O14827 1237 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 NDUFB10O96000 172 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 KRT33BQ14525 404 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 GPD1LQ8N335 351 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 CCHCR1Q8TD31 782 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 ASNSD1Q9NWL6 643 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 HACD3Q9P035 362 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 A0A1B0GUA9 196 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 A8MXQ7 604 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 CTNND1O60716 968 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 LCP1P13796 627 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 DPEP1P16444 411 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 HOXD10P28358 340 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 USP11P51784 963 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 PSMC1P62191 440 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 FAM133BQ5BKY9 247 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 RNF219Q5W0B1 726 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 RSBN1LQ6PCB5 846 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 C1orf228Q6PIY5 440 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 CENPUQ71F23 418 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 SGMS1Q86VZ5 419 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 TSR3Q9UJK0 312 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 AGO2Q9UKV8 859 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 PI4K2BG5E9Z4 385 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 NTSR2O95665 410 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 NCF2P19878 526 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 STAT5BP51692 787 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 RCAN1P53805 252 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 ATP2C1P98194 919 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 TRIM28Q13263 835 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 COG2Q14746 738 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 CEP55Q53EZ4 464 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 HABP4Q5JVS0 413 aaKnown RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 MAP3K21Q5TCX8 1036 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 SAMD7Q7Z3H4 446 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 HAUS6Q7Z4H7 955 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 CCDC197Q8NCU1 140 aa8.47□□□□□ -1.05
CTNND1-207ENST00000426142 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-207ENST00000426142 NEK9Q8TD19 979 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms