RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MAPK7Q13164 816 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 CAPSQ13938 189 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 CNKSR3Q6P9H4 555 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 SV2BQ7L1I2 683 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 BSNDQ8WZ55 320 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 SEPT8Q92599 483 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 PADI3Q9ULW8 664 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 EVPLQ92817 2033 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 CSDE1O75534 798 aaKnown RBP27.12■■□□□ 1.93
VEGFA-209ENST00000425836 RPS6KA5O75582 802 aa27.12■■□□□ 1.93
VEGFA-209ENST00000425836 TFDP1Q14186 410 aa27.12■■□□□ 1.93
VEGFA-209ENST00000425836 SHHQ15465 462 aa27.12■■□□□ 1.93
VEGFA-209ENST00000425836 OTOP2Q7RTS6 562 aa27.12■■□□□ 1.93
VEGFA-209ENST00000425836 CUEDC2Q9H467 287 aa27.12■■□□□ 1.93
VEGFA-209ENST00000425836 POU5F1BQ06416 359 aa27.11■■□□□ 1.93
VEGFA-209ENST00000425836 FAM228AQ86W67 206 aa27.11■■□□□ 1.93
VEGFA-209ENST00000425836 FSIP1Q8NA03 581 aa27.11■■□□□ 1.93
VEGFA-209ENST00000425836 MRPS27Q92552 414 aaKnown RBP27.11■■□□□ 1.93
VEGFA-209ENST00000425836 CEP290O15078 2479 aa27.11■■□□□ 1.93
VEGFA-209ENST00000425836 ACTN1P12814 892 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 NDUFA8P51970 172 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 PTENP60484 403 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 CACNB1Q02641 598 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-209ENST00000425836 PAK2Q13177 524 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 CSPP1Q1MSJ5 1256 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 HERVK_113Q902F9 699 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 DRC1Q96MC2 740 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 REEP2Q9BRK0 252 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 PYM1Q9BRP8 204 aaKnown RBP27.1■■□□□ 1.93
VEGFA-209ENST00000425836 GOLPH3LQ9H4A5 285 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 ERVK-5Q9HDB9 667 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 ST3GAL5Q9UNP4 418 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 COLQQ9Y215 455 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-209ENST00000425836 SCN5AQ14524 2016 aa27.1■■□□□ 1.93
VEGFA-209ENST00000425836 GOLGA6L4A6NEF3 574 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 MYMKA6NI61 221 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 SFI1A8K8P3 1242 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 GPR182O15218 404 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 NFX1Q12986 1120 aaKnown RBP27.09■■□□□ 1.93
VEGFA-209ENST00000425836 GIT2Q14161 759 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 APBB2Q92870 758 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 INO80BQ9C086 356 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-209ENST00000425836 MINDY3Q9H8M7 445 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 KBTBD4Q9NVX7 518 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 TCHHQ07283 1943 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 FGFR4P22455 802 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 PHKA2P46019 1235 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 IKBKEQ14164 716 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 CLEC17AQ6ZS10 378 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 SRGAP1Q7Z6B7 1085 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 IFNLR1Q8IU57 520 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-209ENST00000425836 TMEM87AQ8NBN3 555 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 IFT74Q96LB3 600 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 CXXC1Q9P0U4 656 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-209ENST00000425836 ODF2LQ9ULJ1 636 aa27.09■■□□□ 1.93
VEGFA-209ENST00000425836 LRRIQ4A6NIV6 560 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 KRT18P05783 430 aaKnown RBP27.08■■□□□ 1.93
VEGFA-209ENST00000425836 NAMPTP43490 491 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 PPP2R5AQ15172 486 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 ODR4Q5SWX8 454 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 DDX12PQ92771 950 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 STAMQ92783 540 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 NFKBIZQ9BYH8 718 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 TNMDQ9H2S6 317 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 TMX1Q9H3N1 280 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 C17orf75Q9HAS0 396 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 SERTAD1Q9UHV2 236 aa27.08■■□□□ 1.93
VEGFA-209ENST00000425836 ABHD14A-ACY1A0A1B0GW23 586 aa27.07■■□□□ 1.92
VEGFA-209ENST00000425836 BAIAP3O94812 1187 aa27.07■■□□□ 1.92
VEGFA-209ENST00000425836 SYKP43405 635 aa27.07■■□□□ 1.92
VEGFA-209ENST00000425836 RASIP1Q5U651 963 aa27.07■■□□□ 1.92
VEGFA-209ENST00000425836 DYMQ7RTS9 669 aa27.07■■□□□ 1.92
VEGFA-209ENST00000425836 TDHQ8IZJ6 230 aa27.07■■□□□ 1.92
VEGFA-209ENST00000425836 ACTN4O43707 911 aaKnown RBP27.06■■□□□ 1.92
VEGFA-209ENST00000425836 SLFN14P0C7P3 912 aa27.06■■□□□ 1.92
VEGFA-209ENST00000425836 PEX3P56589 373 aa27.06■■□□□ 1.92
VEGFA-209ENST00000425836 LONRF3Q496Y0 759 aa27.06■■□□□ 1.92
VEGFA-209ENST00000425836 CDCA2Q69YH5 1023 aaPredicted RBP27.06■■□□□ 1.92
VEGFA-209ENST00000425836 DNAJC19Q96DA6 116 aa27.06■■□□□ 1.92
VEGFA-209ENST00000425836 RNPC3Q96LT9 517 aaKnown RBP27.06■■□□□ 1.92
VEGFA-209ENST00000425836 MAGEF1Q9HAY2 307 aa27.06■■□□□ 1.92
VEGFA-209ENST00000425836 SIP14410 1827 aa27.06■■□□□ 1.92
VEGFA-209ENST00000425836 PLS3P13797 630 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 SFPQP23246 707 aaKnown RBP eCLIP27.05■■□□□ 1.92
VEGFA-209ENST00000425836 NPTX2P47972 431 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 DEPTORQ8TB45 409 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 KIFC3Q9BVG8 833 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 TET1Q8NFU7 2136 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 ZBBXA8MT70 800 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 GADD45BO75293 160 aaPredicted RBP27.05■■□□□ 1.92
VEGFA-209ENST00000425836 ZNF131P52739 623 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 MBTD1Q05BQ5 628 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 DMP1Q13316 513 aaPredicted RBP27.05■■□□□ 1.92
VEGFA-209ENST00000425836 RTN4RL1Q86UN2 441 aaPredicted RBP27.05■■□□□ 1.92
VEGFA-209ENST00000425836 CEP57L1Q8IYX8 460 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 NTPCRQ9BSD7 190 aaKnown RBP27.05■■□□□ 1.92
VEGFA-209ENST00000425836 LRRC27Q9C0I9 530 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 MTIF3Q9H2K0 278 aaKnown RBP27.05■■□□□ 1.92
VEGFA-209ENST00000425836 USP25Q9UHP3 1055 aa27.05■■□□□ 1.92
VEGFA-209ENST00000425836 ADGRA3Q8IWK6 1321 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms