RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 IQUBQ8NA54 791 aa24.29■■□□□ 1.48
HMGA2-205ENST00000425208 DHX58Q96C10 678 aa24.29■■□□□ 1.48
HMGA2-205ENST00000425208 INO80BQ9C086 356 aaPredicted RBP24.29■■□□□ 1.48
HMGA2-205ENST00000425208 CUEDC2Q9H467 287 aa24.29■■□□□ 1.48
HMGA2-205ENST00000425208 KCNH3Q9ULD8 1083 aa24.29■■□□□ 1.48
HMGA2-205ENST00000425208 NOC2LQ9Y3T9 749 aaKnown RBP24.29■■□□□ 1.48
HMGA2-205ENST00000425208 MICAL3Q7RTP6 2002 aa24.29■■□□□ 1.48
HMGA2-205ENST00000425208 A0A1W2PQ27 194 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 A0A1W2PQ64 194 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 A0A1W2PQD8 194 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 GOLGA6L4A6NEF3 574 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 GPR182O15218 404 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 POLR2DO15514 142 aaKnown RBP24.28■■□□□ 1.48
HMGA2-205ENST00000425208 BAIAP3O94812 1187 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 PHKA2P46019 1235 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 RAD51AP2Q09MP3 1159 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 CAPSQ13938 189 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 SHHQ15465 462 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 E2F4Q16254 413 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 SV2BQ7L1I2 683 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 TDHQ8IZJ6 230 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 IFT122Q9HBG6 1241 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 PADI3Q9ULW8 664 aa24.28■■□□□ 1.48
HMGA2-205ENST00000425208 A0A1B0GVL5 298 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 KRT18P05783 430 aaKnown RBP24.27■■□□□ 1.48
HMGA2-205ENST00000425208 PFKFB1P16118 471 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 POU5F1BQ06416 359 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 NFX1Q12986 1120 aaKnown RBP24.27■■□□□ 1.48
HMGA2-205ENST00000425208 IKBKEQ14164 716 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 PPP2R5AQ15172 486 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 TPRNQ4KMQ1 711 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 ARSHQ5FYA8 562 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 FAM228AQ86W67 206 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 HERVK_113Q902F9 699 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 IFT74Q96LB3 600 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 RNPC3Q96LT9 517 aaKnown RBP24.27■■□□□ 1.48
HMGA2-205ENST00000425208 COLQQ9Y215 455 aaPredicted RBP24.27■■□□□ 1.48
HMGA2-205ENST00000425208 LAMA3Q16787 3333 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 ABHD14A-ACY1A0A1B0GW23 586 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 A0A1W2PPC1 479 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 LRRIQ4A6NIV6 560 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 ZBBXA8MT70 800 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 EFCAB14O75071 495 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 SFPQP23246 707 aaKnown RBP eCLIP24.27■■□□□ 1.48
HMGA2-205ENST00000425208 NAMPTP43490 491 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 SRGAP1Q7Z6B7 1085 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 DAW1Q8N136 415 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 MRPS27Q92552 414 aaKnown RBP24.27■■□□□ 1.48
HMGA2-205ENST00000425208 FTHL17Q9BXU8 183 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 POLD4Q9HCU8 107 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 ODF2LQ9ULJ1 636 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 ST3GAL5Q9UNP4 418 aa24.27■■□□□ 1.48
HMGA2-205ENST00000425208 RBAK-RBAKDNI3L0D1 243 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 PTENP60484 403 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 DMP1Q13316 513 aaPredicted RBP24.26■■□□□ 1.47
HMGA2-205ENST00000425208 TCTN1Q2MV58 587 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 FSIP1Q8NA03 581 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 BSNDQ8WZ55 320 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 REEP2Q9BRK0 252 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 NFKBIZQ9BYH8 718 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 TNMDQ9H2S6 317 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 C17orf75Q9HAS0 396 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 MAGEF1Q9HAY2 307 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 ERVK-5Q9HDB9 667 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 HPSEQ9Y251 543 aa24.26■■□□□ 1.47
HMGA2-205ENST00000425208 NPHP3-ACAD11A0A0J9YXS1 232 aa24.25■■□□□ 1.47
HMGA2-205ENST00000425208 CSDE1O75534 798 aaKnown RBP24.25■■□□□ 1.47
HMGA2-205ENST00000425208 CACNB1Q02641 598 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-205ENST00000425208 MAPK7Q13164 816 aa24.25■■□□□ 1.47
HMGA2-205ENST00000425208 FAM43BQ6ZT52 329 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-205ENST00000425208 IFNLR1Q8IU57 520 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-205ENST00000425208 TRIOBPQ9H2D6 2365 aa24.25■■□□□ 1.47
HMGA2-205ENST00000425208 FAM237AA0A1B0GTK4 181 aa24.24■■□□□ 1.47
HMGA2-205ENST00000425208 TBCAO75347 108 aaKnown RBP24.24■■□□□ 1.47
HMGA2-205ENST00000425208 SYKP43405 635 aa24.24■■□□□ 1.47
HMGA2-205ENST00000425208 KCNJ6P48051 423 aa24.24■■□□□ 1.47
HMGA2-205ENST00000425208 ZBTB8OSQ8IWT0 167 aa24.24■■□□□ 1.47
HMGA2-205ENST00000425208 DEPTORQ8TB45 409 aa24.24■■□□□ 1.47
HMGA2-205ENST00000425208 LRRC27Q9C0I9 530 aa24.24■■□□□ 1.47
HMGA2-205ENST00000425208 C2orf40Q9H1Z8 148 aa24.24■■□□□ 1.47
HMGA2-205ENST00000425208 CXXC1Q9P0U4 656 aaPredicted RBP24.24■■□□□ 1.47
HMGA2-205ENST00000425208 INO80B-WBP1J3KQ70 363 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 FAM13AO94988 1023 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 FGFR4P22455 802 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 NDUFA8P51970 172 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 PEX3P56589 373 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 AMPD3Q01432 767 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 GIT2Q14161 759 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 PCBP1Q15365 356 aaKnown RBP eCLIP24.23■■□□□ 1.477e-7■■■■□ 22.5
HMGA2-205ENST00000425208 RASIP1Q5U651 963 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 CDCA2Q69YH5 1023 aaPredicted RBP24.23■■□□□ 1.47
HMGA2-205ENST00000425208 CATSPER4Q7RTX7 472 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 CEP57L1Q8IYX8 460 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 DDX12PQ92771 950 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 MINDY3Q9H8M7 445 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 KBTBD4Q9NVX7 518 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 LARSQ9P2J5 1176 aaKnown RBP24.23■■□□□ 1.47
HMGA2-205ENST00000425208 KCNG1Q9UIX4 513 aa24.23■■□□□ 1.47
HMGA2-205ENST00000425208 MYMKA6NI61 221 aa24.22■■□□□ 1.47
HMGA2-205ENST00000425208 CCDC169A6NNP5 214 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms