RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TPCN1Q9ULQ1 816 aa19.92■□□□□ 0.78
GPC1-203ENST00000425056 TRIOO75962 3097 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 ARID2Q68CP9 1835 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 EML1O00423 815 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 MAFO75444 373 aaPredicted RBP19.91■□□□□ 0.78
GPC1-203ENST00000425056 XBP1P17861 261 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 ZNF410Q86VK4 478 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 VN1R2Q8NFZ6 395 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 TRAIPQ9BWF2 469 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 CHST12Q9NRB3 414 aa19.91■□□□□ 0.78
GPC1-203ENST00000425056 A0A087WZ62 844 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 DDX11L8A8MPP1 907 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 PER2O15055 1255 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 CSDE1O75534 798 aaKnown RBP19.9■□□□□ 0.78
GPC1-203ENST00000425056 NEFLP07196 543 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 SFPQP23246 707 aaKnown RBP eCLIP19.9■□□□□ 0.78
GPC1-203ENST00000425056 PBX3P40426 434 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 ANAPC15P60006 121 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 HERC4Q5GLZ8 1057 aaPredicted RBP19.9■□□□□ 0.78
GPC1-203ENST00000425056 PLA2G4FQ68DD2 849 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 RNF169Q8NCN4 708 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 RSPH1Q8WYR4 309 aa19.9■□□□□ 0.78
GPC1-203ENST00000425056 JPH2Q9BR39 696 aaPredicted RBP19.9■□□□□ 0.78
GPC1-203ENST00000425056 FDXACB1Q9BRP7 624 aaPredicted RBP19.9■□□□□ 0.78
GPC1-203ENST00000425056 MRPL9Q9BYD2 267 aaKnown RBP19.9■□□□□ 0.78
GPC1-203ENST00000425056 PUF60Q9UHX1 559 aaKnown RBP19.9■□□□□ 0.78
GPC1-203ENST00000425056 USP15Q9Y4E8 981 aaPredicted RBP19.9■□□□□ 0.78
GPC1-203ENST00000425056 TBX3O15119 743 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 CTDNEP1O95476 244 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 QARSP47897 775 aaKnown RBP19.89■□□□□ 0.77
GPC1-203ENST00000425056 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
GPC1-203ENST00000425056 KCNC3Q14003 757 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 PLPP4Q5VZY2 271 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 RHPN2Q8IUC4 686 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 RNF135Q8IUD6 432 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 HELQQ8TDG4 1101 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 OXER1Q8TDS5 423 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 NAP1L4Q99733 375 aaKnown RBP19.89■□□□□ 0.77
GPC1-203ENST00000425056 TCF25Q9BQ70 676 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 INO80BQ9C086 356 aaPredicted RBP19.89■□□□□ 0.77
GPC1-203ENST00000425056 NGRNQ9NPE2 291 aaKnown RBP19.89■□□□□ 0.77
GPC1-203ENST00000425056 CYP26B1Q9NR63 512 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 GJB4Q9NTQ9 266 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 SPG21Q9NZD8 308 aa19.89■□□□□ 0.77
GPC1-203ENST00000425056 SUCLA2Q9P2R7 463 aaPredicted RBP19.89■□□□□ 0.77
GPC1-203ENST00000425056 DKC1O60832 514 aaKnown RBP eCLIP19.88■□□□□ 0.77
GPC1-203ENST00000425056 PHKA2P46019 1235 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 ANKRD1Q15327 319 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 TMEM184AQ6ZMB5 413 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 PIK3AP1Q6ZUJ8 805 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 SLC39A11Q8N1S5 342 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 HAS1Q92839 578 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 ENTPD7Q9NQZ7 604 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 WRAP73Q9P2S5 460 aaPredicted RBP19.88■□□□□ 0.77
GPC1-203ENST00000425056 MUTYHQ9UIF7 546 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 PIN4Q9Y237 131 aaKnown RBP19.88■□□□□ 0.77
GPC1-203ENST00000425056 PPME1Q9Y570 386 aa19.88■□□□□ 0.77
GPC1-203ENST00000425056 LOC730098B7Z3J9 87 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 CCNT1O60563 726 aaKnown RBP19.87■□□□□ 0.77
GPC1-203ENST00000425056 P4HBP07237 508 aaKnown RBP19.87■□□□□ 0.77
GPC1-203ENST00000425056 SRGAP2BP0DMP2 458 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 AK2P54819 239 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 KRT17Q04695 432 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 CBX2Q14781 532 aaPredicted RBP19.87■□□□□ 0.77
GPC1-203ENST00000425056 TWF2Q6IBS0 349 aaKnown RBP19.87■□□□□ 0.77
GPC1-203ENST00000425056 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 SLC7A3Q8WY07 619 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 SUSD6Q92537 303 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 WASF1Q92558 559 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 NLRP4Q96MN2 994 aa19.87■□□□□ 0.77
GPC1-203ENST00000425056 DHX33Q9H6R0 707 aaKnown RBP19.87■□□□□ 0.77
GPC1-203ENST00000425056 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
GPC1-203ENST00000425056 MUC6Q6W4X9 2439 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 TECTAO75443 2155 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 HIDE1A8MVS5 230 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 DTNBO60941 627 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 SKIP12755 728 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 RAB27AP51159 221 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 NPEPPSP55786 919 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 SPIRE1Q08AE8 756 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 EARS2Q5JPH6 523 aaKnown RBP19.86■□□□□ 0.77
GPC1-203ENST00000425056 KSR1Q8IVT5 923 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 C4orf19Q8IY42 314 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 EXOC8Q8IYI6 725 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 LXNQ9BS40 222 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 PHF7Q9BWX1 381 aaPredicted RBP19.86■□□□□ 0.77
GPC1-203ENST00000425056 IFT122Q9HBG6 1241 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 FAM105AQ9NUU6 356 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 COL4A3BPQ9Y5P4 624 aa19.86■□□□□ 0.77
GPC1-203ENST00000425056 ZNF318Q5VUA4 2279 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 FDPSP14324 419 aaKnown RBP19.85■□□□□ 0.77
GPC1-203ENST00000425056 RFC5P40937 340 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 POLGP54098 1239 aaPredicted RBP19.85■□□□□ 0.77
GPC1-203ENST00000425056 BCAR1P56945 870 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 EPHA7Q15375 998 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 CATSPER4Q7RTX7 472 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 TMC7Q7Z402 723 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 ZNF579Q8NAF0 562 aaKnown RBP19.85■□□□□ 0.77
GPC1-203ENST00000425056 TNFRSF25Q93038 417 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 CEP170P1Q96L14 293 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms