RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 GLRA2P23416 452 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 PHKA2P46019 1235 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 WDR5P61964 334 aaKnown RBP16.43■□□□□ 0.22
TMEM248-204ENST00000424964 AXDND1Q5T1B0 1012 aaPredicted RBP16.43■□□□□ 0.22
TMEM248-204ENST00000424964 SHC4Q6S5L8 630 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 CCDC73Q6ZRK6 1079 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 C1orf186Q6ZWK4 172 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 PDILTQ8N807 584 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 KIFAP3Q92845 792 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 FTHL17Q9BXU8 183 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 BLOC1S4Q9NUP1 217 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 STK17AQ9UEE5 414 aa16.43■□□□□ 0.22
TMEM248-204ENST00000424964 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.42■□□□□ 0.22
TMEM248-204ENST00000424964 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.42■□□□□ 0.22
TMEM248-204ENST00000424964 LRRIQ4A6NIV6 560 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 AMHP03971 560 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 ATP2A2P16615 1042 aaKnown RBP16.42■□□□□ 0.22
TMEM248-204ENST00000424964 STAT6P42226 847 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 DEFB103AP81534 67 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 RAD51AP2Q09MP3 1159 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 CAPSQ13938 189 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 LRIT3Q3SXY7 679 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
TMEM248-204ENST00000424964 SRGAP1Q7Z6B7 1085 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 GPBP1Q86WP2 473 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 LRRC15Q8TF66 581 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 LARP4BQ92615 738 aaKnown RBP16.42■□□□□ 0.22
TMEM248-204ENST00000424964 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 IFT122Q9HBG6 1241 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 CHMP5Q9NZZ3 219 aa16.42■□□□□ 0.22
TMEM248-204ENST00000424964 GRXCR1A8MXD5 290 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 ENPP3O14638 875 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 HIP1RO75146 1068 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 KRT18P05783 430 aaKnown RBP16.41■□□□□ 0.22
TMEM248-204ENST00000424964 SFPQP23246 707 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMEM248-204ENST00000424964 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 PTENP60484 403 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 PPP2R5AQ15172 486 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 MYOCDQ8IZQ8 938 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 DRC1Q96MC2 740 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 SLC9A7Q96T83 725 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 TIPINQ9BVW5 301 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 TMX1Q9H3N1 280 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 KCND2Q9NZV8 630 aa16.41■□□□□ 0.22
TMEM248-204ENST00000424964 MYH11P35749 1972 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 A0A087X0B3 334 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 NPHP3-ACAD11A0A0J9YXS1 232 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.4■□□□□ 0.22
TMEM248-204ENST00000424964 DENND3A2RUS2 1198 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 INO80B-WBP1J3KQ70 363 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 ZSCAN20P17040 1043 aaPredicted RBP16.4■□□□□ 0.22
TMEM248-204ENST00000424964 IBSPP21815 317 aaPredicted RBP16.4■□□□□ 0.22
TMEM248-204ENST00000424964 POU5F1BQ06416 359 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 ARSHQ5FYA8 562 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 RESP18Q5W5W9 173 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 FAM109BQ6ICB4 259 aaPredicted RBP16.4■□□□□ 0.22
TMEM248-204ENST00000424964 SV2BQ7L1I2 683 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 RTN4RL1Q86UN2 441 aaPredicted RBP16.4■□□□□ 0.22
TMEM248-204ENST00000424964 DEPTORQ8TB45 409 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 IPO9Q96P70 1041 aaKnown RBP16.4■□□□□ 0.22
TMEM248-204ENST00000424964 ADAM2Q99965 735 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 ZBED2Q9BTP6 218 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 MINDY3Q9H8M7 445 aa16.4■□□□□ 0.22
TMEM248-204ENST00000424964 RANBP2P49792 3224 aaKnown RBP16.4■□□□□ 0.22
TMEM248-204ENST00000424964 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 SFI1A8K8P3 1242 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 MGEA5O60502 916 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 ERLIN2O94905 339 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 UPP2O95045 317 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 NAMPTP43490 491 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 PEX3P56589 373 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 SMAD3P84022 425 aaKnown RBP16.39■□□□□ 0.21
TMEM248-204ENST00000424964 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
TMEM248-204ENST00000424964 NAALADL2Q58DX5 795 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 FAM117BQ6P1L5 589 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 FAM43BQ6ZT52 329 aaPredicted RBP16.39■□□□□ 0.21
TMEM248-204ENST00000424964 TMCO2Q7Z6W1 182 aaPredicted RBP16.39■□□□□ 0.21
TMEM248-204ENST00000424964 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 ZBTB8OSQ8IWT0 167 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 DAW1Q8N136 415 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 DHX58Q96C10 678 aa16.39■□□□□ 0.21
TMEM248-204ENST00000424964 TSPYL2Q9H2G4 693 aaPredicted RBP16.39■□□□□ 0.21
TMEM248-204ENST00000424964 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
TMEM248-204ENST00000424964 CMA1P23946 247 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 RABGGTBP53611 331 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 NCBP1Q09161 790 aaKnown RBP16.38■□□□□ 0.21
TMEM248-204ENST00000424964 MAPK7Q13164 816 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 DMP1Q13316 513 aaPredicted RBP16.38■□□□□ 0.21
TMEM248-204ENST00000424964 IFNLR1Q8IU57 520 aaPredicted RBP16.38■□□□□ 0.21
TMEM248-204ENST00000424964 IQUBQ8NA54 791 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 LINC01599Q8WXQ3 324 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 NFKBIZQ9BYH8 718 aa16.38■□□□□ 0.21
TMEM248-204ENST00000424964 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms