RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 PLCD3Q8N3E9 789 aa18.23■□□□□ 0.51
PUDP-203ENST00000424830 TMEM105Q8N8V8 129 aa18.23■□□□□ 0.51
PUDP-203ENST00000424830 NLRP7Q8WX94 980 aa18.23■□□□□ 0.51
PUDP-203ENST00000424830 ZNF668Q96K58 619 aaPredicted RBP18.23■□□□□ 0.51
PUDP-203ENST00000424830 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
PUDP-203ENST00000424830 NAP1L2Q9ULW6 460 aaPredicted RBP18.23■□□□□ 0.51
PUDP-203ENST00000424830 CXCL14O95715 111 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 WEE2P0C1S8 567 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 NBL1P41271 181 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 EXOSC10Q01780 885 aaKnown RBP18.22■□□□□ 0.51
PUDP-203ENST00000424830 PRKCEQ02156 737 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 TBC1D8BQ0IIM8 1120 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 ZDHHC14Q8IZN3 488 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 VPS52Q8N1B4 723 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 ZMYND12Q9H0C1 365 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 USTQ9Y2C2 406 aa18.22■□□□□ 0.51
PUDP-203ENST00000424830 CCDC196A0A1B0GTZ2 297 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 PRR23AA6NEV1 266 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 NT5C1B-RDH14C9J2C7 533 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 ZC3H11AO75152 810 aaKnown RBP eCLIP18.21■□□□□ 0.51
PUDP-203ENST00000424830 ASGR2P07307 311 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 GNA11P29992 359 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 CDC27P30260 824 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 FGD1P98174 961 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 ASCL5Q7RTU5 278 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 GCOM2Q9BZD3 368 aaPredicted RBP18.21■□□□□ 0.51
PUDP-203ENST00000424830 ZBP1Q9H171 429 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 SMOC2Q9H3U7 446 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 CHST12Q9NRB3 414 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 DISC1Q9NRI5 854 aa18.21■□□□□ 0.51
PUDP-203ENST00000424830 FGFR4P22455 802 aa18.2■□□□□ 0.5
PUDP-203ENST00000424830 CIITAP33076 1130 aa18.2■□□□□ 0.5
PUDP-203ENST00000424830 POLGP54098 1239 aaPredicted RBP18.2■□□□□ 0.5
PUDP-203ENST00000424830 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
PUDP-203ENST00000424830 C12orf76Q8N812 135 aaPredicted RBP18.2■□□□□ 0.5
PUDP-203ENST00000424830 BICD2Q8TD16 824 aa18.2■□□□□ 0.5
PUDP-203ENST00000424830 FAM217BQ9NTX9 383 aaPredicted RBP18.2■□□□□ 0.5
PUDP-203ENST00000424830 LIMD1Q9UGP4 676 aa18.2■□□□□ 0.5
PUDP-203ENST00000424830 IRAK3Q9Y616 596 aa18.2■□□□□ 0.5
PUDP-203ENST00000424830 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 ZNF862O60290 1169 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 CTSAP10619 480 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 SKIP12755 728 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 SFPQP23246 707 aaKnown RBP eCLIP18.19■□□□□ 0.5
PUDP-203ENST00000424830 SFNP31947 248 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 PHKA2P46019 1235 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 CLCN5P51795 746 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 JAK3P52333 1124 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 KRT32Q14532 448 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 CABP7Q86V35 215 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 PPFIBP1Q86W92 1011 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 ACSF2Q96CM8 615 aaPredicted RBP18.19■□□□□ 0.5
PUDP-203ENST00000424830 CYP26B1Q9NR63 512 aa18.19■□□□□ 0.5
PUDP-203ENST00000424830 DENND4AQ7Z401 1863 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 CHMP2AO43633 222 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 GAS7O60861 476 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 EPCAMP16422 314 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
PUDP-203ENST00000424830 RNASELQ05823 741 aaKnown RBP18.18■□□□□ 0.5
PUDP-203ENST00000424830 TWF2Q6IBS0 349 aaKnown RBP18.18■□□□□ 0.5
PUDP-203ENST00000424830 GLB1LQ6UWU2 654 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 DDX53Q86TM3 631 aaKnown RBP18.18■□□□□ 0.5
PUDP-203ENST00000424830 TMEM173Q86WV6 379 aaPredicted RBP18.18■□□□□ 0.5
PUDP-203ENST00000424830 AUTS2Q8WXX7 1259 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 NKD2Q969F2 451 aaPredicted RBP18.18■□□□□ 0.5
PUDP-203ENST00000424830 LENG9Q96B70 501 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 IGSF21Q96ID5 467 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 TRAIPQ9BWF2 469 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 SFXN1Q9H9B4 322 aa18.18■□□□□ 0.5
PUDP-203ENST00000424830 GVINP1Q7Z2Y8 2422 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 CSDE1O75534 798 aaKnown RBP18.17■□□□□ 0.5
PUDP-203ENST00000424830 HMGB1P09429 215 aaKnown RBP18.17■□□□□ 0.5
PUDP-203ENST00000424830 DNM2P50570 870 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
PUDP-203ENST00000424830 UGCGQ16739 394 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 TMC5Q6UXY8 1006 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 CCDC149Q6ZUS6 474 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 OTOP3Q7RTS5 596 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 FRMD5Q7Z6J6 570 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 FLCNQ8NFG4 579 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 RIT2Q99578 217 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 TEKT3Q9BXF9 490 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 INO80BQ9C086 356 aaPredicted RBP18.17■□□□□ 0.5
PUDP-203ENST00000424830 STK39Q9UEW8 545 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 SEPT9Q9UHD8 586 aaPredicted RBP18.17■□□□□ 0.5
PUDP-203ENST00000424830 PIN4Q9Y237 131 aaKnown RBP18.17■□□□□ 0.5
PUDP-203ENST00000424830 INPP5FQ9Y2H2 1132 aa18.17■□□□□ 0.5
PUDP-203ENST00000424830 ADAMTS3O15072 1205 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 MSH4O15457 936 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 RAB27AP51159 221 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 ADCK5Q3MIX3 580 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 TSGA10IPQ3SY00 556 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 NOMO2Q5JPE7 1267 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 LRCH2Q5VUJ6 765 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 SLC22A17Q8WUG5 538 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 LPPQ93052 612 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 EMILIN2Q9BXX0 1053 aa18.16■□□□□ 0.5
PUDP-203ENST00000424830 TBC1D13Q9NVG8 400 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms