RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CXCL14O95715 111 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 SKIP12755 728 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 AOC1P19801 751 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 PBX3P40426 434 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 RTN1Q16799 776 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 ACSF2Q96CM8 615 aaPredicted RBP17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 RTP3Q9BQQ7 232 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 ZMYND12Q9H0C1 365 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 NRBP2Q9NSY0 501 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 CDH22Q9UJ99 828 aa17.6■□□□□ 0.41
RPUSD3-204ENST00000424438 ZBTB43O43298 467 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 ZNF623O75123 536 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 RARS2Q5T160 578 aaKnown RBP17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 CWF19L1Q69YN2 538 aaKnown RBP17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 C15orf39Q6ZRI6 1047 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 OTOP3Q7RTS5 596 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 GPR149Q86SP6 731 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 CCDC105Q8IYK2 499 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 VPS52Q8N1B4 723 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 FLCNQ8NFG4 579 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 HELQQ8TDG4 1101 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 IGSF21Q96ID5 467 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 PPP1R16BQ96T49 567 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 HINFPQ9BQA5 517 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 SFXN1Q9H9B4 322 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 GABBR1Q9UBS5 961 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 LIMD1Q9UGP4 676 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 DBR1Q9UK59 544 aaKnown RBP17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 ACACBO00763 2458 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 OTOGLQ3ZCN5 2332 aa17.59■□□□□ 0.41
RPUSD3-204ENST00000424438 ZNF862O60290 1169 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 LMNAP02545 664 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 OATP04181 439 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 ASGR2P07307 311 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 TARBP2Q15633 366 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 TSGA10IPQ3SY00 556 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 CYP26C1Q6V0L0 522 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 RAB11FIP4Q86YS3 637 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 CCDC12Q8WUD4 166 aaPredicted RBP17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 DUSP12Q9UNI6 340 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 C2orf16Q68DN1 1984 aa17.58■□□□□ 0.4
RPUSD3-204ENST00000424438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 PAPLNO95428 1278 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 SFNP31947 248 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 PHKA2P46019 1235 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 RAB27AP51159 221 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 TDGQ13569 410 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 ANGPT1Q15389 498 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 CCDC149Q6ZUS6 474 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 KIAA2013Q8IYS2 634 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 REXO1Q8N1G1 1221 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 CMASQ8NFW8 434 aaPredicted RBP17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 LENG9Q96B70 501 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 CNTNAP3BQ96NU0 1288 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 RIT2Q99578 217 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 ESYT1Q9BSJ8 1104 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 LRRC2Q9BYS8 371 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 CNTNAP3Q9BZ76 1288 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 GCOM2Q9BZD3 368 aaPredicted RBP17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 INO80BQ9C086 356 aaPredicted RBP17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 FAM217BQ9NTX9 383 aaPredicted RBP17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 IGSF9Q9P2J2 1179 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 FANCMQ8IYD8 2048 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 CEP250Q9BV73 2442 aa17.57■□□□□ 0.4
RPUSD3-204ENST00000424438 DOCK8Q8NF50 2099 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 IGKV6-21A0A0C4DH24 114 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 CCDC196A0A1B0GTZ2 297 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 C1RP00736 705 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 EPCAMP16422 314 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 NPR3P17342 541 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 GNA11P29992 359 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 PRKCEQ02156 737 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 TBC1D8BQ0IIM8 1120 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 JAKMIP3Q5VZ66 844 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 GLB1LQ6UWU2 654 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 CABP7Q86V35 215 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 ZNF410Q86VK4 478 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 LRRC71Q8N4P6 559 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 SMOC2Q9H3U7 446 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 C6orf50Q9HD87 102 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 DISC1Q9NRI5 854 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 BRPF3Q9ULD4 1205 aa17.56■□□□□ 0.4
RPUSD3-204ENST00000424438 NID2Q14112 1375 aa17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 GALTP07902 379 aa17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 SFPQP23246 707 aaKnown RBP eCLIP17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 JAK3P52333 1124 aa17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 PTPN14Q15678 1187 aa17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 NOMO2Q5JPE7 1267 aa17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 TMEM173Q86WV6 379 aaPredicted RBP17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 C12orf76Q8N812 135 aaPredicted RBP17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 RNF169Q8NCN4 708 aa17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 NIFKQ9BYG3 293 aaKnown RBP17.55■□□□□ 0.4
RPUSD3-204ENST00000424438 NRDE2Q9H7Z3 1164 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms