RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FSHRP23945 695 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 RPS9P46781 194 aaKnown RBP7.27□□□□□ -1.25
SDCBP-203ENST00000424270 FNTBP49356 437 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 HSD17B4P51659 736 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 PLCB4Q15147 1175 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 COL28A1Q2UY09 1125 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 MARCH8Q5T0T0 291 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 SH3PXD2AQ5TCZ1 1133 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 DAB2IPQ5VWQ8 1189 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 ZKSCAN2Q63HK3 967 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 PARM1Q6UWI2 310 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 RSPO2Q6UXX9 243 aaPredicted RBP7.27□□□□□ -1.25
SDCBP-203ENST00000424270 SPATA31D4Q6ZUB0 917 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 DDX53Q86TM3 631 aaKnown RBP7.27□□□□□ -1.25
SDCBP-203ENST00000424270 NLRX1Q86UT6 975 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 GLIS3Q8NEA6 775 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 SEPT1Q8WYJ6 367 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 MAP4K1Q92918 833 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 SCLT1Q96NL6 688 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 IGSF5Q9NSI5 407 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 INPP5FQ9Y2H2 1132 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 TELO2Q9Y4R8 837 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 PCDHA2Q9Y5H9 948 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 CEP295Q9C0D2 2601 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 MIA3Q5JRA6 1907 aa7.27□□□□□ -1.25
SDCBP-203ENST00000424270 DENND4AQ7Z401 1863 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 FRYQ5TBA9 3013 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 ASPMQ8IZT6 3477 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 CARNS1A5YM72 827 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 ANHXE9PGG2 379 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 HMMRO75330 724 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 RFPL2O75678 378 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 STAM2O75886 525 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 URODP06132 367 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 CNPP09543 421 aaKnown RBP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 CNR2P34972 360 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 CXCL12P48061 93 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 KIZQ2M2Z5 673 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 CYP26C1Q6V0L0 522 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 FAM43BQ6ZT52 329 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 STOX1Q6ZVD7 989 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 HOMER1Q86YM7 354 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 LURAP1LQ8IV03 231 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 ZNF710Q8N1W2 664 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 KBTBD3Q8NAB2 608 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 CMASQ8NFW8 434 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 ADAM32Q8TC27 787 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 GATA6Q92908 595 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 FGF14Q92915 247 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 IGSF21Q96ID5 467 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 LRIG1Q96JA1 1093 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 OSMRQ99650 979 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 KXD1Q9BQD3 176 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 RPP25Q9BUL9 199 aaKnown RBP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 DDX23Q9BUQ8 820 aaKnown RBP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 PHF20Q9BVI0 1012 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 KAT14Q9H8E8 782 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 RXFP3Q9NSD7 469 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 MAP3K20Q9NYL2 800 aaKnown RBP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 POLIQ9UNA4 740 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 IRAK3Q9Y616 596 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 SPEGQ15772 3267 aa7.26□□□□□ -1.25
SDCBP-203ENST00000424270 FNDC1Q4ZHG4 1894 aaPredicted RBP7.26□□□□□ -1.25
SDCBP-203ENST00000424270 ASH1LQ9NR48 2969 aaKnown RBP7.25□□□□□ -1.25
SDCBP-203ENST00000424270 SMIM35A0A1B0GVV1 85 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 HRO43593 1189 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 RAB11FIP3O75154 756 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 PARP1P09874 1014 aaKnown RBP7.25□□□□□ -1.25
SDCBP-203ENST00000424270 ZNF806P0C7X5 589 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 CCDC192P0DO97 292 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 RDXP35241 583 aaKnown RBP7.25□□□□□ -1.25
SDCBP-203ENST00000424270 WTAPQ15007 396 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 LONRF3Q496Y0 759 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 ASPRV1Q53RT3 343 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 LONP2Q86WA8 852 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 METTL13Q8N6R0 699 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 HNRNPLLQ8WVV9 542 aaKnown RBP7.25□□□□□ -1.25
SDCBP-203ENST00000424270 CLDN23Q96B33 292 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
SDCBP-203ENST00000424270 SEC62Q99442 399 aaKnown RBP7.25□□□□□ -1.25
SDCBP-203ENST00000424270 ZKSCAN3Q9BRR0 538 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 EDEM2Q9BV94 578 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 SMOC1Q9H4F8 434 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 HEBP1Q9NRV9 189 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 STK39Q9UEW8 545 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 SSX2IPQ9Y2D8 614 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 ZFP37Q9Y6Q3 630 aaPredicted RBP7.25□□□□□ -1.25
SDCBP-203ENST00000424270 MYH7P12883 1935 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 KDM3AQ9Y4C1 1321 aa7.25□□□□□ -1.25
SDCBP-203ENST00000424270 PATJQ8NI35 1801 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 CACNA1IQ9P0X4 2223 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 MAST4O15021 2626 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 C4orf47A7E2U8 309 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 CYSRT1A8MQ03 144 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 MAN2B1O00754 1011 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 TM4SF5O14894 197 aa7.24□□□□□ -1.25
SDCBP-203ENST00000424270 HYAL3O43820 417 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-203ENST00000424270 ORC4O43929 436 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms