RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 ATF7P17544 494 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PPM1AP35813 382 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PBX3P40426 434 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PPP2R5CQ13362 524 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 DUSP6Q16828 381 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PLPP4Q5VZY2 271 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PLA2G4FQ68DD2 849 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PPP4R3AQ6IN85 833 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 ANO5Q75V66 913 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 ZNF598Q86UK7 904 aaKnown RBP20.74■□□□□ 0.91
SREBF1-206ENST00000423161 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 FAM20AQ96MK3 541 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 FDXACB1Q9BRP7 624 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-206ENST00000423161 KCNMB3Q9NPA1 279 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 ENTPD7Q9NQZ7 604 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 GJB4Q9NTQ9 266 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 SUCLA2Q9P2R7 463 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-206ENST00000423161 PUF60Q9UHX1 559 aaKnown RBP20.74■□□□□ 0.91
SREBF1-206ENST00000423161 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
SREBF1-206ENST00000423161 ARIH1Q9Y4X5 557 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-206ENST00000423161 SFPQP23246 707 aaKnown RBP eCLIP20.73■□□□□ 0.91
SREBF1-206ENST00000423161 RBM10P98175 930 aaKnown RBP20.73■□□□□ 0.91
SREBF1-206ENST00000423161 PIK3AP1Q6ZUJ8 805 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 ZNF410Q86VK4 478 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 RHPN2Q8IUC4 686 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 VN1R2Q8NFZ6 395 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 OXER1Q8TDS5 423 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 TCF25Q9BQ70 676 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 JPH2Q9BR39 696 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-206ENST00000423161 INO80BQ9C086 356 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-206ENST00000423161 CHST12Q9NRB3 414 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 SPG21Q9NZD8 308 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 USP15Q9Y4E8 981 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-206ENST00000423161 TRIOO75962 3097 aa20.73■□□□□ 0.91
SREBF1-206ENST00000423161 CCNT1O60563 726 aaKnown RBP20.72■□□□□ 0.91
SREBF1-206ENST00000423161 QARSP47897 775 aaKnown RBP20.72■□□□□ 0.91
SREBF1-206ENST00000423161 ANAPC15P60006 121 aa20.72■□□□□ 0.91
SREBF1-206ENST00000423161 KRT17Q04695 432 aa20.72■□□□□ 0.91
SREBF1-206ENST00000423161 RNF135Q8IUD6 432 aa20.72■□□□□ 0.91
SREBF1-206ENST00000423161 NLRP4Q96MN2 994 aa20.72■□□□□ 0.91
SREBF1-206ENST00000423161 MRPL9Q9BYD2 267 aaKnown RBP20.72■□□□□ 0.91
SREBF1-206ENST00000423161 CYP26B1Q9NR63 512 aa20.72■□□□□ 0.91
SREBF1-206ENST00000423161 ORC3Q9UBD5 711 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-206ENST00000423161 MUTYHQ9UIF7 546 aa20.72■□□□□ 0.91
SREBF1-206ENST00000423161 MUC6Q6W4X9 2439 aa20.72■□□□□ 0.91
SREBF1-206ENST00000423161 DKC1O60832 514 aaKnown RBP eCLIP20.71■□□□□ 0.915e-7■■■■□ 19.3
SREBF1-206ENST00000423161 CTDNEP1O95476 244 aa20.71■□□□□ 0.91
SREBF1-206ENST00000423161 PHKA2P46019 1235 aa20.71■□□□□ 0.91
SREBF1-206ENST00000423161 AK2P54819 239 aa20.71■□□□□ 0.91
SREBF1-206ENST00000423161 NPEPPSP55786 919 aa20.71■□□□□ 0.91
SREBF1-206ENST00000423161 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
SREBF1-206ENST00000423161 TWF2Q6IBS0 349 aaKnown RBP20.71■□□□□ 0.91
SREBF1-206ENST00000423161 KSR1Q8IVT5 923 aa20.71■□□□□ 0.91
SREBF1-206ENST00000423161 NAP1L4Q99733 375 aaKnown RBP20.71■□□□□ 0.91
SREBF1-206ENST00000423161 NGRNQ9NPE2 291 aaKnown RBP20.71■□□□□ 0.91
SREBF1-206ENST00000423161 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
SREBF1-206ENST00000423161 TBX3O15119 743 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 MARCH6O60337 910 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 P4HBP07237 508 aaKnown RBP20.7■□□□□ 0.9
SREBF1-206ENST00000423161 SRGAP2BP0DMP2 458 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 HERC4Q5GLZ8 1057 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-206ENST00000423161 CATSPER4Q7RTX7 472 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 TMC7Q7Z402 723 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 POTEDQ86YR6 584 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 SLC39A11Q8N1S5 342 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 SLC7A3Q8WY07 619 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 WASF1Q92558 559 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 HAS1Q92839 578 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 TRAIPQ9BWF2 469 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 WRAP73Q9P2S5 460 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-206ENST00000423161 TECTAO75443 2155 aa20.7■□□□□ 0.9
SREBF1-206ENST00000423161 HIDE1A8MVS5 230 aa20.69■□□□□ 0.9
SREBF1-206ENST00000423161 POLGP54098 1239 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-206ENST00000423161 EARS2Q5JPH6 523 aaKnown RBP20.69■□□□□ 0.9
SREBF1-206ENST00000423161 NCAPH2Q6IBW4 605 aa20.69■□□□□ 0.9
SREBF1-206ENST00000423161 ZNF579Q8NAF0 562 aaKnown RBP20.69■□□□□ 0.9
SREBF1-206ENST00000423161 LPPQ93052 612 aa20.69■□□□□ 0.9
SREBF1-206ENST00000423161 CEP170P1Q96L14 293 aa20.69■□□□□ 0.9
SREBF1-206ENST00000423161 LXNQ9BS40 222 aa20.69■□□□□ 0.9
SREBF1-206ENST00000423161 COL4A3BPQ9Y5P4 624 aa20.69■□□□□ 0.9
SREBF1-206ENST00000423161 ZNF318Q5VUA4 2279 aa20.69■□□□□ 0.9
SREBF1-206ENST00000423161 FAM205CA6NFA0 338 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 LOC730098B7Z3J9 87 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 SKIP12755 728 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 TECP42680 631 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 ALDH7A1P49419 539 aaKnown RBP20.68■□□□□ 0.9
SREBF1-206ENST00000423161 BCAR1P56945 870 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 NR5A1Q13285 461 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 KCNC3Q14003 757 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 EPHA7Q15375 998 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 LONRF3Q496Y0 759 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 LLGL2Q6P1M3 1020 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 TMEM184AQ6ZMB5 413 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 EXOC8Q8IYI6 725 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 RSPH1Q8WYR4 309 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 PHF7Q9BWX1 381 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-206ENST00000423161 IFT122Q9HBG6 1241 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 BRMS1Q9HCU9 246 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 FAM105AQ9NUU6 356 aa20.68■□□□□ 0.9
SREBF1-206ENST00000423161 PPME1Q9Y570 386 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms