RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 ISCUQ9H1K1 167 aa10.04□□□□□ -0.8
PAPD4-202ENST00000423041 MLXIPQ9HAP2 919 aa10.04□□□□□ -0.8
PAPD4-202ENST00000423041 SEC63Q9UGP8 760 aaKnown RBP10.04□□□□□ -0.8
PAPD4-202ENST00000423041 KIF28PB7ZC32 967 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 ATP5HO75947 161 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 RFC4P35249 363 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 LMBRD2Q68DH5 695 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 KSR2Q6VAB6 950 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 KLHL7Q8IXQ5 586 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 GAB3Q8WWW8 586 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 USP6NLQ92738 828 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 ZNF184Q99676 751 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 IRF2BPLQ9H1B7 796 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 LRMDAQ9H2I8 198 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 DENND2DQ9H6A0 471 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 TIMMDC1Q9NPL8 285 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 KLHL14Q9P2G3 628 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 RNF14Q9UBS8 474 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 TRIM17Q9Y577 477 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 CTDP1Q9Y5B0 961 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 GPC6Q9Y625 555 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 SHANK3Q9BYB0 1731 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 SMIM31A0A1B0GVY4 71 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 POLR2DO15514 142 aaKnown RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 RAD51CO43502 376 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 ZPR1O75312 459 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 MMP13P45452 471 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 RXRGP48443 463 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 EMP3P54852 163 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 COG7P83436 770 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 CUL1Q13616 776 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 WDR59Q6PJI9 974 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 B3GNT6Q6ZMB0 384 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 DHX32Q7L7V1 743 aaKnown RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 ZNF589Q86UQ0 364 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 DNAJC7Q99615 494 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 GBA3Q9H227 469 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 NHEJ1Q9H9Q4 299 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 TLDC2A0PJX2 215 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 SPDYE16A6NNV3 312 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 TTI1O43156 1089 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 DNA2P51530 1060 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 TNNC1P63316 161 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 CABP7Q86V35 215 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 CCDC127Q96BQ5 260 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 MAELQ96JY0 434 aaKnown RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 CCDC85AQ96PX6 553 aaPredicted RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 TMEM237Q96Q45 408 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 STK33Q9BYT3 514 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 CCDC134Q9H6E4 229 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 GJB4Q9NTQ9 266 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 NDUFA13Q9P0J0 144 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 SRP68Q9UHB9 627 aaKnown RBP10.03□□□□□ -0.8
PAPD4-202ENST00000423041 TOGARAM1Q9Y4F4 1720 aa10.03□□□□□ -0.8
PAPD4-202ENST00000423041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 CCDC160A6NGH7 325 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 ECE2O60344 883 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 CBFA2T3O75081 653 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 TAF5LO75529 589 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 GJB6O95452 261 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 TKTP29401 623 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 MSLNQ13421 630 aaPredicted RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 ITGA9Q13797 1035 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 INTS8Q75QN2 995 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 LRRC49Q8IUZ0 686 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 NRG4Q8WWG1 115 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 SNRKQ9NRH2 765 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 FAF1Q9UNN5 650 aaPredicted RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 CAPN9O14815 690 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 PDIA3P30101 505 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 ACADVLP49748 655 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 EIF3BP55884 814 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 RNASE9P60153 205 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 ERVK-9P63128 1117 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 SPAG1Q07617 926 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 ZBTB17Q13105 803 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 SPIDRQ14159 915 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 HLFQ16534 295 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 WDR72Q3MJ13 1102 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 CERKLQ49MI3 558 aaPredicted RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 KHDC1Q4VXA5 237 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 VWA3BQ502W6 1294 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 DEPDC1Q5TB30 811 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 INTS5Q6P9B9 1019 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 DDX42Q86XP3 938 aaKnown RBP eCLIP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 CCDC24Q8N4L8 307 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 TTC39CQ8N584 583 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 EIF1ADQ8N9N8 165 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 DGCR14Q96DF8 476 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 HEPHQ9BQS7 1158 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 TBC1D10AQ9BXI6 508 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 PARVBQ9HBI1 364 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 LIMA1Q9UHB6 759 aaKnown RBP10.02□□□□□ -0.81
PAPD4-202ENST00000423041 MTUS1Q9ULD2 1270 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 ITGB4P16144 1822 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 BRWD3Q6RI45 1802 aa10.02□□□□□ -0.81
PAPD4-202ENST00000423041 CCDC162PA2VCL2 907 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms