RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 LRRC3BQ96PB8 259 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 PLA2G2FQ9BZM2 168 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 RAB23Q9ULC3 237 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 RRP7AQ9Y3A4 280 aaKnown RBP2.3□□□□□ -2.04
UBE2W-202ENST00000422906 DDX49Q9Y6V7 483 aaKnown RBP2.3□□□□□ -2.04
UBE2W-202ENST00000422906 LRP1BQ9NZR2 4599 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 DNAH5Q8TE73 4624 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 SPATA31C2B4DYI2 1134 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 NUDT7P0C024 238 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 FDX1P10109 184 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 ADD2P35612 726 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 GNAI1P63096 354 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 SCRN1Q12765 414 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 PTPN14Q15678 1187 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 C4orf17Q53FE4 359 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 DAB2IPQ5VWQ8 1189 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 CCDC155Q8N6L0 562 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 TATDN2Q93075 761 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 ZNF428Q96B54 188 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 LENG9Q96B70 501 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 GPR20Q99678 358 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 CXXC4Q9H2H0 198 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 STARD7Q9NQZ5 370 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 STK39Q9UEW8 545 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 ZNHIT2Q9UHR6 403 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 YLPM1P49750 1951 aaKnown RBP2.3□□□□□ -2.04
UBE2W-202ENST00000422906 CEP290O15078 2479 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 NEDD4P46934 1319 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 PNMA6EA0A0J9YXQ4 647 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 FAM171A2A8MVW0 826 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 ESPNB1AK53 854 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 RNF224P0DH78 156 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 RARBP10826 455 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 CHMLP26374 656 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 THBS2P35442 1172 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 ZNF252P-AS1Q0IIN9 211 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 ALX1Q15699 326 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 NEUROD2Q15784 382 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 PTPRNQ16849 979 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 TMPRSS7Q7RTY8 843 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 RABEPKQ7Z6M1 372 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 METTL3Q86U44 580 aaKnown RBP2.3□□□□□ -2.04
UBE2W-202ENST00000422906 NPAS4Q8IUM7 802 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 NPAS3Q8IXF0 933 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 SLC32A1Q9H598 525 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 MTMR4Q9NYA4 1195 aa2.3□□□□□ -2.04
UBE2W-202ENST00000422906 TSR3Q9UJK0 312 aaKnown RBP2.3□□□□□ -2.04
UBE2W-202ENST00000422906 MAP1BP46821 2468 aaKnown RBP2.3□□□□□ -2.04
UBE2W-202ENST00000422906 KIAA1109Q2LD37 5005 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 ECI2O75521 394 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 GH2P01242 217 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 GRNP28799 593 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 AARSP49588 968 aaKnown RBP eCLIP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SARSP49591 514 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 PDE4BQ07343 736 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 GPR155Q7Z3F1 870 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 DDX53Q86TM3 631 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SKAP1Q86WV1 359 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 CDCA7LQ96GN5 454 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 MTG1Q9BT17 334 aaPredicted RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SEMA4CQ9C0C4 833 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 DUSP15Q9H1R2 295 aaPredicted RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 PRKRIP1Q9H875 184 aaPredicted RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 FBXO28Q9NVF7 368 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 HOXC10Q9NYD6 342 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 KNSTRNQ9Y448 316 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SCN1AP35498 2009 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 MYBPHLA2RUH7 354 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 ORC4O43929 436 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 IGHMBP2P38935 993 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 PTGER3P43115 390 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 YBX1P67809 324 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 BEX3Q00994 111 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SEC23AQ15436 765 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 BAP1Q92560 729 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 DNASE1L2Q92874 299 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SPRY4Q9C004 299 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SEMA4GQ9NTN9 838 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 NFASCO94856 1347 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 NIPBLQ6KC79 2804 aaeCLIP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 GSTTP1A0A1W2PQM5 241 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 TMEM189-UBE2V1I3L0A0 370 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 EFSO43281 561 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 MSI1O43347 362 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 IL15P40933 162 aaPredicted RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 ABCG1P45844 678 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 GSK3AP49840 483 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 DYNLL1P63167 89 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 SLC14A1Q13336 389 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 CELF3Q5SZQ8 465 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 GADL1Q6ZQY3 521 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 ZNF710Q8N1W2 664 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 DCLK2Q8N568 766 aa2.29□□□□□ -2.04
UBE2W-202ENST00000422906 ZFC3H1O60293 1989 aaKnown RBP2.29□□□□□ -2.04
UBE2W-202ENST00000422906 EXPH5Q8NEV8 1989 aa2.28□□□□□ -2.04
UBE2W-202ENST00000422906 IGLV3-22A0A075B6J6 115 aa2.28□□□□□ -2.04
UBE2W-202ENST00000422906 NDUFB10O96000 172 aa2.28□□□□□ -2.04
UBE2W-202ENST00000422906 ZNF883P0CG24 379 aa2.28□□□□□ -2.04
UBE2W-202ENST00000422906 RPL17P18621 184 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms