RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 LARP4BQ92615 738 aaKnown RBP10.29□□□□□ -0.76
PDGFC-202ENST00000422544 NLRP4Q96MN2 994 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 SCLT1Q96NL6 688 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 OSMRQ99650 979 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 POLR3FQ9H1D9 316 aaPredicted RBP10.29□□□□□ -0.76
PDGFC-202ENST00000422544 STK17AQ9UEE5 414 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 RAPGEFL1Q9UHV5 662 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 KCNH3Q9ULD8 1083 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 COL4A3BPQ9Y5P4 624 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 KAT6AQ92794 2004 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 A0A087WZ62 844 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 ASAP2O43150 1006 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 HIP1RO75146 1068 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 CSDE1O75534 798 aaKnown RBP10.28□□□□□ -0.76
PDGFC-202ENST00000422544 PARNO95453 639 aaKnown RBP10.28□□□□□ -0.76
PDGFC-202ENST00000422544 CXCL10P02778 98 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 GLRA2P23416 452 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 RFC2P35250 354 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 NDUFA8P51970 172 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 CDC42EP1Q00587 391 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 MXD4Q14582 209 aaPredicted RBP10.28□□□□□ -0.76
PDGFC-202ENST00000422544 E2F4Q16254 413 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 FBXO47Q5MNV8 452 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 SV2BQ7L1I2 683 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 RPUSD2Q8IZ73 545 aaKnown RBP10.28□□□□□ -0.76
PDGFC-202ENST00000422544 FSIP1Q8NA03 581 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 RNF149Q8NC42 400 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 BSNDQ8WZ55 320 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 MRPS27Q92552 414 aaKnown RBP10.28□□□□□ -0.76
PDGFC-202ENST00000422544 FDXACB1Q9BRP7 624 aaPredicted RBP10.28□□□□□ -0.76
PDGFC-202ENST00000422544 GOLPH3LQ9H4A5 285 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 AGO3Q9H9G7 860 aaKnown RBP10.28□□□□□ -0.76
PDGFC-202ENST00000422544 IL23AQ9NPF7 189 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 HPSEQ9Y251 543 aa10.28□□□□□ -0.76
PDGFC-202ENST00000422544 FAM237AA0A1B0GTK4 181 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 MYMKA6NI61 221 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 GADD45BO75293 160 aaPredicted RBP10.27□□□□□ -0.77
PDGFC-202ENST00000422544 RPS6KA5O75582 802 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 KRT18P05783 430 aaKnown RBP10.27□□□□□ -0.77
PDGFC-202ENST00000422544 FGFR4P22455 802 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 EIF4BP23588 611 aaKnown RBP10.27□□□□□ -0.77
PDGFC-202ENST00000422544 GUCY2CP25092 1073 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 CD52P31358 61 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 SYKP43405 635 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 CAPSQ13938 189 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 TFDP1Q14186 410 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 TCTN1Q2MV58 587 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 PLEKHG4Q58EX7 1191 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 TMEM240Q5SV17 173 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 TSHZ1Q6ZSZ6 1077 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 ZNF365Q70YC5 407 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 DYMQ7RTS9 669 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 DAW1Q8N136 415 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 DBF4BQ8NFT6 615 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 SEPT8Q92599 483 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 STAMQ92783 540 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 KIFAP3Q92845 792 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.27□□□□□ -0.77
PDGFC-202ENST00000422544 GCOM2Q9BZD3 368 aaPredicted RBP10.27□□□□□ -0.77
PDGFC-202ENST00000422544 UBE2OQ9C0C9 1292 aaKnown RBP10.27□□□□□ -0.77
PDGFC-202ENST00000422544 IFT122Q9HBG6 1241 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 PRDM6Q9NQX0 595 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 KCND2Q9NZV8 630 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 SERTAD1Q9UHV2 236 aa10.27□□□□□ -0.77
PDGFC-202ENST00000422544 NOC2LQ9Y3T9 749 aaKnown RBP10.27□□□□□ -0.77
PDGFC-202ENST00000422544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
PDGFC-202ENST00000422544 LRRIQ4A6NIV6 560 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 PRPF40AO75400 957 aaKnown RBP10.26□□□□□ -0.77
PDGFC-202ENST00000422544 FGBP02675 491 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 PFKMP08237 780 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 DARSP14868 501 aaKnown RBP10.26□□□□□ -0.77
PDGFC-202ENST00000422544 PEX3P56589 373 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
PDGFC-202ENST00000422544 MAPK7Q13164 816 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 GIT2Q14161 759 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 SHHQ15465 462 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 LONRF3Q496Y0 759 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 C9orf50Q5SZB4 431 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 FAM109BQ6ICB4 259 aaPredicted RBP10.26□□□□□ -0.77
PDGFC-202ENST00000422544 CLEC17AQ6ZS10 378 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 OTOP2Q7RTS6 562 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 FAM228AQ86W67 206 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 USP38Q8NB14 1042 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 TMEM87AQ8NBN3 555 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 DDX12PQ92771 950 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 IFT74Q96LB3 600 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 DRC1Q96MC2 740 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 REEP2Q9BRK0 252 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 PYM1Q9BRP8 204 aaKnown RBP10.26□□□□□ -0.77
PDGFC-202ENST00000422544 TIPINQ9BVW5 301 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
PDGFC-202ENST00000422544 CUEDC2Q9H467 287 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 ZHX3Q9H4I2 956 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 MINDY3Q9H8M7 445 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 KBTBD4Q9NVX7 518 aa10.26□□□□□ -0.77
PDGFC-202ENST00000422544 PADI3Q9ULW8 664 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms