RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 THAP9Q9H5L6 903 aa18.85■□□□□ 0.61
CCDC28B-202ENST00000421922 TMEM206Q9H813 350 aa18.85■□□□□ 0.61
CCDC28B-202ENST00000421922 EVPLQ92817 2033 aa18.85■□□□□ 0.61
CCDC28B-202ENST00000421922 TPM3P06753 285 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 TPM2P07951 284 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 ARL2P36404 184 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 NAMPTP43490 491 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 TFDP1Q14186 410 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 MXD4Q14582 209 aaPredicted RBP18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 ZC2HC1CQ53FD0 456 aaPredicted RBP18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 HSP90AA4PQ58FG1 418 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 EFCAB12Q6NXP0 572 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 TTI2Q6NXR4 508 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 RNF180Q86T96 592 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 LRRC71Q8N4P6 559 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 PCSK9Q8NBP7 692 aaKnown RBP18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 GOLGA5Q8TBA6 731 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 MAP7D2Q96T17 732 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 SRRTQ9BXP5 876 aaKnown RBP18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 TYW1Q9NV66 732 aaKnown RBP18.84■□□□□ 0.61
CCDC28B-202ENST00000421922 ZBTB42B2RXF5 422 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 CBFA2T2O43439 604 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 C22orf31O95567 290 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 SMIM10L2AP0DMW4 78 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 SMIM10L2BP0DMW5 78 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 KLRC1P26715 233 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 DEKP35659 375 aaKnown RBP18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 PMS1P54277 932 aaKnown RBP18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 FOXR2Q6PJQ5 311 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 SARM1Q6SZW1 724 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 ST6GALNAC4Q9H4F1 302 aa18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 SAMSN1Q9NSI8 373 aaKnown RBP18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 SUCLA2Q9P2R7 463 aaPredicted RBP18.83■□□□□ 0.61
CCDC28B-202ENST00000421922 NRCAMQ92823 1304 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 IGKV6-21A0A0C4DH24 114 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 DENND3A2RUS2 1198 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 MYADML2A6NDP7 307 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 PDXKO00764 312 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 GNAT1P11488 350 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 GLRA2P23416 452 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 RPL13P26373 211 aaKnown RBP18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 PURAQ00577 322 aaKnown RBP18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 FKBP3Q00688 224 aaKnown RBP18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 STRN3Q13033 797 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 EDRF1Q3B7T1 1238 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 FILIP1LQ4L180 1135 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 ZBTB8OSQ8IWT0 167 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 C7orf31Q8N865 590 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 ASAP3Q8TDY4 903 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 BSNDQ8WZ55 320 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 BICD1Q96G01 975 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 MED15Q96RN5 788 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 CTAGE1Q96RT6 745 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 FIZ1Q96SL8 496 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 GBP3Q9H0R5 595 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 AKT3Q9Y243 479 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 PTPN22Q9Y2R2 807 aa18.83■□□□□ 0.6
CCDC28B-202ENST00000421922 PHLPP2Q6ZVD8 1323 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 KCNJ18B7U540 433 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 CETN3O15182 167 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 ASAP2O43150 1006 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 ADAMTS4O75173 837 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 ADCY5O95622 1261 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 CLCN3P51790 818 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 IRX5P78411 483 aaPredicted RBP18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 GTF2BQ00403 316 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 FANCCQ00597 558 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 KCNJ12Q14500 433 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 SLC9C1Q4G0N8 1177 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 MTHFD1LQ6UB35 978 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 RHPN2Q8IUC4 686 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 KAT2BQ92831 832 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 SCLT1Q96NL6 688 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 DUSP9Q99956 384 aaKnown RBP18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 KIFC3Q9BVG8 833 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 C2orf40Q9H1Z8 148 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 KCTD10Q9H3F6 313 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 FRMPD3Q5JV73 1810 aa18.82■□□□□ 0.6
CCDC28B-202ENST00000421922 C17orf102A2RUQ5 167 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 PPP1R37O75864 691 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 ATP1A3P13637 1013 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 ZNF18P17022 549 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 EEF1GP26641 437 aaKnown RBP18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 LAMTOR4Q0VGL1 99 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 CDKAL1Q5VV42 579 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 NFRKBQ6P4R8 1299 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 KSR1Q8IVT5 923 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 TMEM161BQ8NDZ6 487 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 SH3TC2Q8TF17 1288 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 LMBR1Q8WVP7 490 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 PRPF31Q8WWY3 499 aaKnown RBP18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 CEP63Q96MT8 703 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 NTPCRQ9BSD7 190 aaKnown RBP18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 SETD4Q9NVD3 440 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 CGNQ9P2M7 1197 aaKnown RBP18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 TRAF3IP3Q9Y228 551 aa18.81■□□□□ 0.6
CCDC28B-202ENST00000421922 HAS3O00219 553 aa18.8■□□□□ 0.6
CCDC28B-202ENST00000421922 GNA14O95837 355 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms