RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 ADGRF4Q8IZF3 695 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 ENAHQ8N8S7 591 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 PNMA1Q8ND90 353 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 EXOC6Q8TAG9 804 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 SYTL5Q8TDW5 730 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 SLC22A17Q8WUG5 538 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 PIK3R5Q8WYR1 880 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 ESR2Q92731 530 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 STAMQ92783 540 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 GPKOWQ92917 476 aaPredicted RBP eCLIP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 RILPL2Q969X0 211 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 ZFP91Q96JP5 570 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 RPP25Q9BUL9 199 aaKnown RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 DDX23Q9BUQ8 820 aaKnown RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 USP26Q9BXU7 913 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 ARRDC1-AS1Q9H2J1 176 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 RWDD1Q9H446 243 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 RNF41Q9H4P4 317 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 BCAS3Q9H6U6 928 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 TOMM22Q9NS69 142 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 FAM217BQ9NTX9 383 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 TUBE1Q9UJT0 475 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 ZNF215Q9UL58 517 aaPredicted RBP6.5□□□□□ -1.37
HDAC8-212ENST00000421523 ASXL3Q9C0F0 2248 aa6.5□□□□□ -1.37
HDAC8-212ENST00000421523 CHURC1-FNTBB4DL54 471 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 B4E1Z4 1266 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 NT5C1B-RDH14C9J2C7 533 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 HRO43593 1189 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 PPP1R11O60927 126 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 GSPT1P15170 499 aaKnown RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 MARK3P27448 753 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 FNTBP49356 437 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 METAP2P50579 478 aaKnown RBP eCLIP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 MFAP1P55081 439 aaKnown RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 IGBP1P78318 339 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 ADAM17P78536 824 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 PRKCQQ04759 706 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 PPFIA1Q13136 1202 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 BMS1Q14692 1282 aaKnown RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 PPP2R5DQ14738 602 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 WTAPQ15007 396 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 CDC37Q16543 378 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 QRICH1Q2TAL8 776 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 SLC44A4Q53GD3 710 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 CCDC178Q5BJE1 867 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 TCEAL6Q6IPX3 200 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 C15orf39Q6ZRI6 1047 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 LRRC55Q6ZSA7 311 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 TPRG1Q6ZUI0 275 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 ZNF605Q86T29 641 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 VPS52Q8N1B4 723 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 STAG2Q8N3U4 1231 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 TCEAL3Q969E4 200 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 NXPE3Q969Y0 559 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 KLHL5Q96PQ7 755 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 IWS1Q96ST2 819 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 ZSCAN10Q96SZ4 725 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 ADAM2Q99965 735 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 JMJD4Q9H9V9 463 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 WDR6Q9NNW5 1121 aaKnown RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 ZBTB47Q9UFB7 747 aaPredicted RBP6.49□□□□□ -1.37
HDAC8-212ENST00000421523 NEUROG3Q9Y4Z2 214 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 RAI2Q9Y5P3 530 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 KAT6AQ92794 2004 aa6.49□□□□□ -1.37
HDAC8-212ENST00000421523 DOCK5Q9H7D0 1870 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 PALM3A6NDB9 673 aaPredicted RBP6.48□□□□□ -1.37
HDAC8-212ENST00000421523 M0QZ92 97 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 MAP3K13O43283 966 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 SSBP05455 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC8-212ENST00000421523 NR3C2P08235 984 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 LAMP2P13473 410 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 HSD17B4P51659 736 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 ASPRV1Q53RT3 343 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 PARM1Q6UWI2 310 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 CYB5R4Q7L1T6 521 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 IQCA1Q86XH1 822 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 ABI1Q8IZP0 508 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 SLC39A11Q8N1S5 342 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 LRRC43Q8N309 656 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 RNF169Q8NCN4 708 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 FGF14Q92915 247 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 CLDN23Q96B33 292 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 TMEM169Q96HH4 297 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 EDEM2Q9BV94 578 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 OSBPL6Q9BZF3 934 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 ZBP1Q9H171 429 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 ATP6V0A4Q9HBG4 840 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 MAN1C1Q9NR34 630 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 PXMP2Q9NR77 195 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 MAD2L2Q9UI95 211 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 NDRG2Q9UN36 371 aaKnown RBP6.48□□□□□ -1.37
HDAC8-212ENST00000421523 GINS2Q9Y248 185 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 TELO2Q9Y4R8 837 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 TRPV2Q9Y5S1 764 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 APC2O95996 2303 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 ACACAQ13085 2346 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 ABCB11O95342 1321 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 IGSF9BQ9UPX0 1349 aa6.48□□□□□ -1.37
HDAC8-212ENST00000421523 SPTAN1Q13813 2472 aaKnown RBP6.48□□□□□ -1.37
HDAC8-212ENST00000421523 ABCA12Q86UK0 2595 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms