RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 TOPORSQ9NS56 1045 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 DMAC2Q9NW81 257 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PCDHA10Q9Y5I2 948 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 ADGRA3Q8IWK6 1321 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 COL11A1P12107 1806 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 SSU72P8A0A1W2PR75 194 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 POLR3GO15318 223 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 TACC1O75410 805 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 CALCAP01258 141 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PGK2P07205 417 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 CCND2P30279 289 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 NPTX2P47972 431 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 MAPK8IP2Q13387 824 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 DRAP1Q14919 205 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 LONRF2Q1L5Z9 754 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 TMEM63BQ5T3F8 832 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 GLYCTKQ8IVS8 523 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 TLR10Q9BXR5 811 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 METTL14Q9HCE5 456 aaKnown RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 ARGLU1Q9NWB6 273 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 SEPT9Q9UHD8 586 aaPredicted RBP9.6□□□□□ -0.87
SNCA-206ENST00000420646 DNAJC12Q9UKB3 198 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 SNX12Q9UMY4 172 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 ADAMTS5Q9UNA0 930 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 PFASO15067 1338 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 EMSYQ7Z589 1322 aa9.6□□□□□ -0.87
SNCA-206ENST00000420646 MYH11P35749 1972 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 EVI5O60447 810 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 YBX3P16989 372 aaKnown RBP eCLIP9.59□□□□□ -0.87
SNCA-206ENST00000420646 GHRHRQ02643 423 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 BFSP1Q12934 665 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 MTERF2Q49AM1 385 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 NCAPG2Q86XI2 1143 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 TRIM58Q8NG06 486 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 TMEM143Q96AN5 459 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 INPP4AQ96PE3 977 aaPredicted RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 ACAD9Q9H845 621 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 ARFGAP3Q9NP61 516 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 SEPT11Q9NVA2 429 aaKnown RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 HSPBP1Q9NZL4 362 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 JRKLQ9Y4A0 524 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 DENND3A2RUS2 1198 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 FOXN3O00409 490 aaPredicted RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 SLC16A3O15427 465 aaKnown RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 ADRB2P07550 413 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 MYBL2P10244 700 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 ABCB4P21439 1286 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 USP8P40818 1118 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 NOP2P46087 812 aaKnown RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 ACTR2P61160 394 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 LMBRD2Q68DH5 695 aaPredicted RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 ALKBH5Q6P6C2 394 aaKnown RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 NIPA1Q7RTP0 329 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 C4orf19Q8IY42 314 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 U2AF1L4Q8WU68 220 aaKnown RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 ZNF668Q96K58 619 aaPredicted RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 OSBPL9Q96SU4 736 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 EDEM3Q9BZQ6 932 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 JPH1Q9HDC5 661 aaPredicted RBP9.59□□□□□ -0.87
SNCA-206ENST00000420646 TAS2R14Q9NYV8 317 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
SNCA-206ENST00000420646 C19orf81C9J6K1 198 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 DDX3XO00571 662 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNCA-206ENST00000420646 MAP2K1Q02750 393 aaPredicted RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 SUPT20HL1Q3ZLR7 823 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 C1orf220Q5T0J3 134 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 WDR78Q5VTH9 848 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 ZNF662Q6ZS27 426 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 ARHGEF19Q8IW93 802 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 EHBP1Q8NDI1 1231 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 ZBTB10Q96DT7 871 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 IQCDQ96DY2 449 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 NOX5Q96PH1 765 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 FUT8Q9BYC5 575 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 GPR88Q9GZN0 384 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 INTS2Q9H0H0 1204 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 UBE2TQ9NPD8 197 aaPredicted RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 PLCB1Q9NQ66 1216 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 HOXC10Q9NYD6 342 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 SEL1LQ9UBV2 794 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 DBR1Q9UK59 544 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 PPP1R12BO60237 982 aaPredicted RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 ATP4AP20648 1035 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 CNGA1P29973 690 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 JAM2P57087 298 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 MYL7Q01449 175 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 KRT76Q01546 638 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 MKRN3Q13064 507 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 ZNF746Q6NUN9 644 aaPredicted RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 SULF1Q8IWU6 871 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 KRT222Q8N1A0 295 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 TMEM161BQ8NDZ6 487 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 SYN2Q92777 582 aaPredicted RBP9.58□□□□□ -0.88
SNCA-206ENST00000420646 TSGA10Q9BZW7 698 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 TXNRD2Q9NNW7 524 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 KCND2Q9NZV8 630 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 RLFQ13129 1914 aa9.58□□□□□ -0.88
SNCA-206ENST00000420646 F8VZ95 297 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms