RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 MRPL9Q9BYD2 267 aaKnown RBP23.88■■□□□ 1.41
PTPN4-202ENST00000420482 A0A087WZ62 844 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 CARNS1A5YM72 827 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 FDPSP14324 419 aaKnown RBP23.87■■□□□ 1.41
PTPN4-202ENST00000420482 DNAJB1P25685 340 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 LTBRP36941 435 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 KRT17Q04695 432 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 ADAM15Q13444 863 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 DRP2Q13474 957 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 PLA2G4FQ68DD2 849 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 NCAPH2Q6IBW4 605 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 POTEDQ86YR6 584 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 C4orf19Q8IY42 314 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 EFHBQ8N7U6 833 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 NSUN7Q8NE18 718 aaKnown RBP23.87■■□□□ 1.41
PTPN4-202ENST00000420482 HAS1Q92839 578 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 ZNF558Q96NG5 402 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 CASD1Q96PB1 797 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 POP1Q99575 1024 aaKnown RBP23.87■■□□□ 1.41
PTPN4-202ENST00000420482 FDXACB1Q9BRP7 624 aaPredicted RBP23.87■■□□□ 1.41
PTPN4-202ENST00000420482 LXNQ9BS40 222 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 ZSWIM4Q9H7M6 989 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 TLE6Q9H808 572 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 CD207Q9UJ71 328 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 LZTS1Q9Y250 596 aa23.87■■□□□ 1.41
PTPN4-202ENST00000420482 FGFR4P22455 802 aa23.86■■□□□ 1.41
PTPN4-202ENST00000420482 NR5A1Q13285 461 aa23.86■■□□□ 1.41
PTPN4-202ENST00000420482 SAFBQ15424 915 aaKnown RBP eCLIP23.86■■□□□ 1.41
PTPN4-202ENST00000420482 TWF2Q6IBS0 349 aaKnown RBP23.86■■□□□ 1.41
PTPN4-202ENST00000420482 CATSPER4Q7RTX7 472 aa23.86■■□□□ 1.41
PTPN4-202ENST00000420482 TCP11Q8WWU5 503 aa23.86■■□□□ 1.41
PTPN4-202ENST00000420482 PSPC1Q8WXF1 523 aaKnown RBP23.86■■□□□ 1.41
PTPN4-202ENST00000420482 NLRP4Q96MN2 994 aa23.86■■□□□ 1.41
PTPN4-202ENST00000420482 CDCA3Q99618 268 aaPredicted RBP23.86■■□□□ 1.41
PTPN4-202ENST00000420482 CWH43Q9H720 699 aa23.86■■□□□ 1.41
PTPN4-202ENST00000420482 PCDHA12Q9UN75 941 aa23.86■■□□□ 1.41
PTPN4-202ENST00000420482 FAM86C2PA6NEL3 165 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 SRGAP2BP0DMP2 458 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 ALADP13716 330 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 YWHABP31946 246 aaKnown RBP23.85■■□□□ 1.41
PTPN4-202ENST00000420482 IRS1P35568 1242 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 NRIP1P48552 1158 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 RAB27AP51159 221 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 PLCB3Q01970 1234 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 SMAD4Q13485 552 aaKnown RBP23.85■■□□□ 1.41
PTPN4-202ENST00000420482 CALCRLQ16602 461 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 KCNT2Q6UVM3 1135 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 MRPS27Q92552 414 aaKnown RBP23.85■■□□□ 1.41
PTPN4-202ENST00000420482 TRAIPQ9BWF2 469 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 PIN4Q9Y237 131 aaKnown RBP23.85■■□□□ 1.41
PTPN4-202ENST00000420482 COL4A3BPQ9Y5P4 624 aa23.85■■□□□ 1.41
PTPN4-202ENST00000420482 MUC6Q6W4X9 2439 aa23.84■■□□□ 1.41
PTPN4-202ENST00000420482 LARGE1O95461 756 aa23.84■■□□□ 1.41
PTPN4-202ENST00000420482 HOXD11P31277 338 aaPredicted RBP23.84■■□□□ 1.41
PTPN4-202ENST00000420482 GTF2F1P35269 517 aaKnown RBP eCLIP23.84■■□□□ 1.41
PTPN4-202ENST00000420482 BMS1Q14692 1282 aaKnown RBP23.84■■□□□ 1.41
PTPN4-202ENST00000420482 SMAD2Q15796 467 aaKnown RBP23.84■■□□□ 1.41
PTPN4-202ENST00000420482 CLUL1Q15846 466 aa23.84■■□□□ 1.41
PTPN4-202ENST00000420482 RBM23Q86U06 439 aaKnown RBP23.84■■□□□ 1.41
PTPN4-202ENST00000420482 ADHFE1Q8IWW8 467 aa23.84■■□□□ 1.41
PTPN4-202ENST00000420482 DIS3L2Q8IYB7 885 aaKnown RBP23.84■■□□□ 1.41
PTPN4-202ENST00000420482 CCDC43Q96MW1 224 aaKnown RBP23.84■■□□□ 1.41
PTPN4-202ENST00000420482 PLXNA4Q9HCM2 1894 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 ASAP2O43150 1006 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 MBTPS2O43462 519 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 TBX10O75333 385 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 CSDE1O75534 798 aaKnown RBP23.83■■□□□ 1.41
PTPN4-202ENST00000420482 PHKA2P46019 1235 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 NPEPPSP55786 919 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 XKR9Q5GH70 373 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 EARS2Q5JPH6 523 aaKnown RBP23.83■■□□□ 1.41
PTPN4-202ENST00000420482 ADGRD2Q7Z7M1 963 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 HELQQ8TDG4 1101 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 TNFRSF25Q93038 417 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 DYDC2Q96IM9 177 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 DHX33Q9H6R0 707 aaKnown RBP23.83■■□□□ 1.41
PTPN4-202ENST00000420482 NGRNQ9NPE2 291 aaKnown RBP23.83■■□□□ 1.41
PTPN4-202ENST00000420482 ENTPD7Q9NQZ7 604 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 SPG21Q9NZD8 308 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 LIMCH1Q9UPQ0 1083 aa23.83■■□□□ 1.41
PTPN4-202ENST00000420482 BTBD18B2RXH4 712 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 LINC01565O15544 149 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 NEMFO60524 1076 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 DTNBO60941 627 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 ALDH7A1P49419 539 aaKnown RBP23.82■■□□□ 1.4
PTPN4-202ENST00000420482 CYP4A11Q02928 519 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 ZP2Q05996 745 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 DLX2Q07687 328 aaPredicted RBP23.82■■□□□ 1.4
PTPN4-202ENST00000420482 GLB1LQ6UWU2 654 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 SRGAP1Q7Z6B7 1085 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 ZNF598Q86UK7 904 aaKnown RBP23.82■■□□□ 1.4
PTPN4-202ENST00000420482 TPH2Q8IWU9 490 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 PRPF31Q8WWY3 499 aaKnown RBP23.82■■□□□ 1.4
PTPN4-202ENST00000420482 PGBD4Q96DM1 585 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 RNF19AQ9NV58 838 aa23.82■■□□□ 1.4
PTPN4-202ENST00000420482 JAK2O60674 1132 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 SPIRE1Q08AE8 756 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 EMC2Q15006 297 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 CLLU1OSQ5K130 101 aa23.81■■□□□ 1.4
PTPN4-202ENST00000420482 LRRC55Q6ZSA7 311 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms