RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 LAMTOR5O43504 91 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 GALTP07902 379 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 CNPP09543 421 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZSCAN20P17040 1043 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 MAGEA9P43362 315 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 HTR4Q13639 388 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 ACAP1Q15027 740 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 IMMTQ16891 758 aaKnown RBP11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 LINC01465Q8N7H1 131 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 NETO1Q8TDF5 533 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 ATRIPQ8WXE1 791 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 SHDQ96IW2 340 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 PPP1R16BQ96T49 567 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 SPZ1Q9BXG8 430 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 EMILIN2Q9BXX0 1053 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 BCO2Q9BYV7 579 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 ADAMTS10Q9H324 1103 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 NRDE2Q9H7Z3 1164 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 KCNH7Q9NS40 1196 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 STK39Q9UEW8 545 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 USP18Q9UMW8 372 aa11.97□□□□□ -0.49
RAPGEF1-205ENST00000419442 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZC3H11AO75152 810 aaKnown RBP eCLIP11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 VTNP04004 478 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 LAMP2P13473 410 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 SDSP20132 328 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 ATP4AP20648 1035 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 EIF4BP23588 611 aaKnown RBP11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 KLRC2P26717 231 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 SMARCA1P28370 1054 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 ITGB3BPQ13352 177 aaPredicted RBP11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 ABHD15Q6UXT9 468 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 RNF169Q8NCN4 708 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 SDF4Q9BRK5 362 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 TRAIPQ9BWF2 469 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 SENP2Q9HC62 589 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 MAN1C1Q9NR34 630 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 SPATA6Q9NWH7 488 aaPredicted RBP11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 PCDHB15Q9Y5E8 787 aa11.96□□□□□ -0.49
RAPGEF1-205ENST00000419442 RALGAPA1Q6GYQ0 2036 aa11.96□□□□□ -0.5
RAPGEF1-205ENST00000419442 DOCK6Q96HP0 2047 aa11.96□□□□□ -0.5
RAPGEF1-205ENST00000419442 CCDC195A0A1B0GUA6 201 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 CCNE2O96020 404 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 PMLP29590 882 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 SHC2P98077 582 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 CSTF1Q05048 431 aaKnown RBP11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 FAM160B1Q5W0V3 765 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 ZNF707Q96C28 371 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 MAP3K14Q99558 947 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 PSTPIP2Q9H939 334 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 AGO4Q9HCK5 861 aaKnown RBP11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 TBC1D13Q9NVG8 400 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 PCDHA6Q9UN73 950 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 PCDHA8Q9Y5H6 950 aa11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 FASNP49327 2511 aaKnown RBP11.95□□□□□ -0.5
RAPGEF1-205ENST00000419442 INPPL1O15357 1258 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 LRP3O75074 770 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 C1RP00736 705 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 SLC11A1P49279 550 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 NLRP11P59045 1033 aaKnown RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 PRKCQQ04759 706 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 COL9A3Q14050 684 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 RSPO2Q6UXX9 243 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 HDAC7Q8WUI4 952 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 CLDN23Q96B33 292 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 RRP36Q96EU6 259 aaKnown RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 FAM126AQ9BYI3 521 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 PRMT8Q9NR22 394 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 SH2B1Q9NRF2 756 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 DACT1Q9NYF0 836 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 DPP7Q9UHL4 492 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 ANGPTL2Q9UKU9 493 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 NUMBLQ9Y6R0 609 aa11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 CNOT1A5YKK6 2376 aaKnown RBP11.94□□□□□ -0.5
RAPGEF1-205ENST00000419442 SPDYE3A6NKU9 549 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 MAGEB2O15479 319 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 B4GALT3O60512 393 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 DARSP14868 501 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 PHKA2P46019 1235 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 CLCN3P51790 818 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 GPC5P78333 572 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 DMWDQ09019 674 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 MLF2Q15773 248 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 UBE2SQ16763 222 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 PDXDC2PQ6P474 469 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 SMG7Q92540 1137 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 LTB4R2Q9NPC1 389 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 ZNF302Q9NR11 478 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 MRPL17Q9NRX2 175 aaKnown RBP11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 DNAJB4Q9UDY4 337 aa11.93□□□□□ -0.5
RAPGEF1-205ENST00000419442 RCAN3Q9UKA8 241 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms