RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TAX1BP1Q86VP1 789 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 GPR135Q8IZ08 494 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 DNERQ8NFT8 737 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 WDR92Q96MX6 357 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 WWC2-AS2Q96NR7 200 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 TRIM8Q9BZR9 551 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 AGO3Q9H9G7 860 aaKnown RBP6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 JADE2Q9NQC1 790 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 OAZ3Q9UMX2 235 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 EDARQ9UNE0 448 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 VWA7Q9Y334 891 aa6.27□□□□□ -1.41
HMGB1P49-201ENST00000418882 NPEPPSL1A6NEC2 478 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 ULK1O75385 1050 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 RAC3P60763 192 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 ATP2C1P98194 919 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 GAREM2Q75VX8 874 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 PPP1R14CQ8TAE6 165 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 WDR66Q8TBY9 1149 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 ST6GALNAC2Q9UJ37 374 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 USP18Q9UMW8 372 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 PCDHB6Q9Y5E3 794 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 RBM8AQ9Y5S9 174 aaKnown RBP6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 PHLDB1Q86UU1 1377 aa6.26□□□□□ -1.41
HMGB1P49-201ENST00000418882 PATE3B3GLJ2 98 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 K7ESM1 405 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 RAB11FIP3O75154 756 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 SEC24DO94855 1032 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 CR2P20023 1033 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 BUD31P41223 144 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 ADCY7P51828 1080 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 EFEMP1Q12805 493 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 ZNF568Q3ZCX4 644 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 RNF187Q5TA31 235 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 GLB1LQ6UWU2 654 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 CIR1Q86X95 450 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 FAM177A1Q8N128 213 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 PIK3C3Q8NEB9 887 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 ATL2Q8NHH9 583 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 TGFBRAP1Q8WUH2 860 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 GPATCH3Q96I76 525 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 GPHA2Q96T91 129 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 EVLQ9UI08 416 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 ATP8A1Q9Y2Q0 1164 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 NUMBLQ9Y6R0 609 aa6.25□□□□□ -1.41
HMGB1P49-201ENST00000418882 ST20-MTHFSA0A0A6YYL1 179 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 B8ZZF3 427 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 CDC14BO60729 498 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 EVA1CP58658 441 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 ERVK-21P61565 698 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 CD69Q07108 199 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 PPARAQ07869 468 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 TCIRG1Q13488 830 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 IQSEC1Q6DN90 963 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 SPATS2Q86XZ4 545 aaKnown RBP6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 FUKQ8N0W3 1084 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 CDYL2Q8N8U2 506 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 LMBR1Q8WVP7 490 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 GAB3Q8WWW8 586 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 PLA2G12BQ9BX93 195 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 KCTD10Q9H3F6 313 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 C14orf119Q9NWQ9 140 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 PRSS50Q9UI38 385 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 NCANO14594 1321 aa6.24□□□□□ -1.41
HMGB1P49-201ENST00000418882 SLC26A4O43511 780 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 GAAP10253 952 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 LGALS4P56470 323 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 SCAND1P57086 179 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 FSCN1Q16658 493 aaKnown RBP6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 ADGRE4PQ86SQ3 457 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 Q8TCH9 128 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 GFM2Q969S9 779 aaKnown RBP6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 SLC7A6OSQ96CW6 309 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 LOXL4Q96JB6 756 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 HIST1H2AHQ96KK5 128 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 RPL10LQ96L21 214 aaKnown RBP6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 C8orf49Q96NF6 230 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 HIST1H2AJQ99878 128 aa6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 C12orf65Q9H3J6 166 aaKnown RBP6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 PUF60Q9UHX1 559 aaKnown RBP6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 ZFR2Q9UPR6 939 aaKnown RBP6.23□□□□□ -1.41
HMGB1P49-201ENST00000418882 PRRG2O14669 202 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 H2AFYO75367 372 aaKnown RBP6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 TOX4O94842 621 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 LY86O95711 162 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 ENPP1P22413 925 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 GPR3P46089 330 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 BPIFB4P59827 614 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 RIN1Q13671 783 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 RNF219Q5W0B1 726 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 MSL3Q8N5Y2 521 aaKnown RBP6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 ANKRD53Q8N9V6 530 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 PLA2G15Q8NCC3 412 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 SHCBP1Q8NEM2 672 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 SAMD11Q96NU1 681 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 ORAI2Q96SN7 254 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 OSBPL6Q9BZF3 934 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 TMX1Q9H3N1 280 aa6.22□□□□□ -1.41
HMGB1P49-201ENST00000418882 JAG2Q9Y219 1238 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms