RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 BMPR1AP36894 532 aa22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 ATP2C1P98194 919 aaPredicted RBP22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 PDIA5Q14554 519 aa22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 CCDC85BQ15834 202 aaPredicted RBP22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 RILPL1Q5EBL4 403 aa22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 LARP1BQ659C4 914 aaKnown RBP22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 EXOC8Q8IYI6 725 aa22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 PSPC1Q8WXF1 523 aaKnown RBP22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 NLRP4Q96MN2 994 aa22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 MTRQ99707 1265 aa22.99■■□□□ 1.27
PKNOX1-202ENST00000418336 DGAT1O75907 488 aa22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 FGFR1P11362 822 aa22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 BTG3Q14201 252 aaPredicted RBP22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 MCTP1Q6DN14 999 aa22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 ECHDC2Q86YB7 292 aa22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 IFNLR1Q8IU57 520 aaPredicted RBP22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 PPM1EQ8WY54 764 aa22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 HCSTQ9UBK5 93 aa22.98■■□□□ 1.27
PKNOX1-202ENST00000418336 A0A0U1RQF3 1178 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 PP2D1A8MPX8 630 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 LAD1O00515 517 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 MUTP22033 750 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 GLRA2P23416 452 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 HOXA11P31270 313 aaPredicted RBP22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 CAPSQ13938 189 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 TCP11Q8WWU5 503 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 INTS4Q96HW7 963 aaKnown RBP22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 CASD1Q96PB1 797 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 CWH43Q9H720 699 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 ATP6V0A4Q9HBG4 840 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 CHST12Q9NRB3 414 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 PCDHB7Q9Y5E2 793 aa22.97■■□□□ 1.27
PKNOX1-202ENST00000418336 H3BQV1 296 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 POU5F1BQ06416 359 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 CAMK1Q14012 370 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 AMHR2Q16671 573 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 PAN2Q504Q3 1202 aaKnown RBP22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 LRRC55Q6ZSA7 311 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 SRGAP1Q7Z6B7 1085 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 SNX21Q969T3 373 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 SCLT1Q96NL6 688 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 NACC1Q96RE7 527 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 GPRC5CQ9NQ84 441 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 AGPAT5Q9NUQ2 364 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 LRWD1Q9UFC0 647 aa22.96■■□□□ 1.27
PKNOX1-202ENST00000418336 K7ELQ4 463 aaPredicted RBP22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 ASAP2O43150 1006 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 RB1P06400 928 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 SRGAP2CP0DJJ0 459 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 SFPQP23246 707 aaKnown RBP eCLIP22.95■■□□□ 1.262e-6■■■■□ 21.8
PKNOX1-202ENST00000418336 CDC25AP30304 524 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 CTNNB1P35222 781 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 PTENP60484 403 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 GPM6BQ13491 265 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 CLLU1OSQ5K130 101 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 UBXN11Q5T124 520 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 RNF149Q8NC42 400 aa22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 INO80BQ9C086 356 aaPredicted RBP22.95■■□□□ 1.26
PKNOX1-202ENST00000418336 GRM6O15303 877 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 USO1O60763 962 aaKnown RBP22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 ZSCAN20P17040 1043 aaPredicted RBP22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 DNAJB1P25685 340 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 PHKA2P46019 1235 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 KCNK18Q7Z418 384 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 MRPL38Q96DV4 380 aaKnown RBP22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 NFKBIZQ9BYH8 718 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 LRFN2Q9ULH4 789 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 RWDD3Q9Y3V2 267 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 BRWD1Q9NSI6 2320 aa22.94■■□□□ 1.26
PKNOX1-202ENST00000418336 MYO7AQ13402 2215 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 TBKBP1A7MCY6 615 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 MEIS3P2A8K0S8 358 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 GTPBP6O43824 516 aaPredicted RBP22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 SYT1P21579 422 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 MBTD1Q05BQ5 628 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 MXD4Q14582 209 aaPredicted RBP22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 HAUS3Q68CZ6 603 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 MICALL1Q8N3F8 863 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 ERMNQ8TAM6 284 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 BSNDQ8WZ55 320 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 P2RX5Q93086 422 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 PLVAPQ9BX97 442 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 POLR3FQ9H1D9 316 aaPredicted RBP22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 PLXNA4Q9HCM2 1894 aa22.93■■□□□ 1.26
PKNOX1-202ENST00000418336 EOMESO95936 686 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 ITGB1P05556 798 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 CYP11B2P19099 503 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 CCT6AP40227 531 aaKnown RBP22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 RESTQ13127 1097 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 HYIQ5T013 277 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 CATSPER4Q7RTX7 472 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 BRAPQ7Z569 592 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 PNMA5Q96PV4 448 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 TMEM117Q9H0C3 514 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 TYW1Q9NV66 732 aaKnown RBP22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 DACT1Q9NYF0 836 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 PLAGL2Q9UPG8 496 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 KIAA1024Q9UPX6 916 aa22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 PIN4Q9Y237 131 aaKnown RBP22.92■■□□□ 1.26
PKNOX1-202ENST00000418336 TSPAN1O60635 241 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms