RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 GH1P01241 217 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 MUTP22033 750 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 ERCC5P28715 1186 aaPredicted RBP14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 SFNP31947 248 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 ARHGAP1Q07960 439 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 TCTN1Q2MV58 587 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 CNNM4Q6P4Q7 775 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 UNC13DQ70J99 1090 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 SESTD1Q86VW0 696 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 CCDC65Q8IXS2 484 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 BANK1Q8NDB2 785 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 CCDC43Q96MW1 224 aaKnown RBP14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 CTNND2Q9UQB3 1225 aa14.59□□□□□ -0.07
HLA-DMB-258ENST00000418107 PVALEFA0A1B0GWK0 134 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 SPATA31C2B4DYI2 1134 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 KLRC4O43908 158 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 NBNO60934 754 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 ATP9AO75110 1047 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 RHOBTB3O94955 611 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 PTMAP06454 111 aaKnown RBP14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 P4HBP07237 508 aaKnown RBP14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 CDK11BP21127 795 aaKnown RBP14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 STX17P56962 302 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 TMEM31Q5JXX7 168 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 CNKSR3Q6P9H4 555 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 DRC7Q8IY82 874 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 PIGOQ8TEQ8 1089 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 HSD17B14Q9BPX1 270 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 LXNQ9BS40 222 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 ZHX3Q9H4I2 956 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 ZSWIM4Q9H7M6 989 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 PANK4Q9NVE7 773 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 GDAQ9Y2T3 454 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 HCN4Q9Y3Q4 1203 aa14.58□□□□□ -0.08
HLA-DMB-258ENST00000418107 FAM86C2PA6NEL3 165 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 PPP1R3GB7ZBB8 358 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 SORBS3O60504 671 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 CXCL10P02778 98 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 CKBP12277 381 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 SLC12A3P55017 1021 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 SP4Q02446 784 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 RBL2Q08999 1139 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 RAD51AP2Q09MP3 1159 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 ZNF746Q6NUN9 644 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 SYT2Q8N9I0 419 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 RDM1Q8NG50 284 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 NELFBQ8WX92 580 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 TRIM44Q96DX7 344 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 BHMT2Q9H2M3 363 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 SUGCTQ9HAC7 445 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 JPH1Q9HDC5 661 aaPredicted RBP14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 HDAC6Q9UBN7 1215 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 SLC9A2Q9UBY0 812 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 MAPK8IP1Q9UQF2 711 aa14.57□□□□□ -0.08
HLA-DMB-258ENST00000418107 NFASCO94856 1347 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 NPHP3-ACAD11A0A0J9YXS1 232 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 ARHGEF35A5YM69 484 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PSMA7O14818 248 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 RGS20O76081 388 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 GJB5O95377 273 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PSAPP07602 524 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 CD44P16070 742 aaKnown RBP14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 KCNA2P16389 499 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 CYP11B2P19099 503 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 ICAM3P32942 547 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PPP1R2P41236 205 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PRCPP42785 496 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 QARSP47897 775 aaKnown RBP14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PSEN2P49810 448 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PAK1Q13153 545 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PSMD2Q13200 908 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 DGKDQ16760 1214 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 B3GNT9Q6UX72 402 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 C7orf31Q8N865 590 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 GIMAP8Q8ND71 665 aaPredicted RBP14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 ENOX1Q8TC92 643 aaKnown RBP14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 TGS1Q96RS0 853 aaKnown RBP14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PPP1R9BQ96SB3 815 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 RAD9AQ99638 391 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 SLC39A2Q9NP94 309 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 CD320Q9NPF0 282 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 C11orf16Q9NQ32 467 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 LMCD1Q9NZU5 365 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 PCDHA10Q9Y5I2 948 aa14.56□□□□□ -0.08
HLA-DMB-258ENST00000418107 ABHD14A-ACY1A0A1B0GW23 586 aa14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 LINC01553A4QN01 128 aa14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 DKC1O60832 514 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 TBCAO75347 108 aaKnown RBP14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 PARNO95453 639 aaKnown RBP14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 ZNF286BP0CG31 522 aa14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 ERVK-21P61565 698 aa14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 PSMC5P62195 406 aa14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 COASYQ13057 564 aa14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 SPATA1Q5VX52 437 aa14.55□□□□□ -0.08
HLA-DMB-258ENST00000418107 CYFIP1Q7L576 1253 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms