RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 INCENPQ9NQS7 918 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 MYRFQ9Y2G1 1151 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 PTCH2Q9Y6C5 1203 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 TECPR2O15040 1411 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 ADAMTS13Q76LX8 1427 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 NALCNQ8IZF0 1738 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 NINLQ9Y2I6 1382 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 MYBBP1AQ9BQG0 1328 aaKnown RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 FMN2Q9NZ56 1722 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 FAM135BQ49AJ0 1406 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 NSD3Q9BZ95 1437 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 CNOT4O95628 575 aaKnown RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 C4BPAP04003 597 aaKnown RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 MMEP08473 750 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 ZNF888P0CJ79 500 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 MC4RP32245 332 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 BMS1Q14692 1282 aaKnown RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 RALBP1Q15311 655 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 CC2D1BQ5T0F9 858 aaKnown RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 ZNF585AQ6P3V2 769 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 BRAPQ7Z569 592 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 REXO1L1PQ8IX06 675 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 PALM2Q8IXS6 379 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 GIMAP8Q8ND71 665 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 THAP3Q8WTV1 239 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 MKL1Q969V6 931 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 AJUBAQ96IF1 538 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 PRAM1Q96QH2 718 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 UCKL1Q9NWZ5 548 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 KNSTRNQ9Y448 316 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 METP08581 1390 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 PARD3Q8TEW0 1356 aa5.01□□□□□ -1.61
HMGB3P20-201ENST00000417997 ATP7BP35670 1465 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 NWD1Q149M9 1564 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 CDC42BPGQ6DT37 1551 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 PTCH1Q13635 1447 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 CLASP2O75122 1294 aaKnown RBP5□□□□□ -1.61
HMGB3P20-201ENST00000417997 AOAHP28039 575 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 POLD1P28340 1107 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 KCNQ1P51787 676 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 LACTBP83111 547 aaPredicted RBP5□□□□□ -1.61
HMGB3P20-201ENST00000417997 TMEM132BQ14DG7 1078 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 SEC23AQ15436 765 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 C2orf27AQ580R0 203 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 OTOP2Q7RTS6 562 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 IGSF22Q8N9C0 903 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 HIPK4Q8NE63 616 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 GSTCDQ8NEC7 633 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 ERCC4Q92889 916 aaPredicted RBP5□□□□□ -1.61
HMGB3P20-201ENST00000417997 SCLYQ96I15 445 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 KATNBL1Q9H079 304 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 KLC2Q9H0B6 622 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 OSBPL2Q9H1P3 480 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 MEGF9Q9H1U4 602 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 GALNT8Q9NY28 637 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 TCAF1Q9Y4C2 921 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 SLC4A7Q9Y6M7 1214 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 RGPD8O14715 1765 aaPredicted RBP5□□□□□ -1.61
HMGB3P20-201ENST00000417997 BRD4O60885 1362 aaPredicted RBP5□□□□□ -1.61
HMGB3P20-201ENST00000417997 ANKRD36BQ8N2N9 1353 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 ABCC11Q96J66 1382 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 MED14O60244 1454 aa5□□□□□ -1.61
HMGB3P20-201ENST00000417997 NRKQ7Z2Y5 1582 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 NPHP4O75161 1426 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 PRAMEF22A3QJZ6 481 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 CUTAO60888 179 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 HIP1RO75146 1068 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 KRT37O76014 449 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 HMGCRP04035 888 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 IL13RA1P78552 427 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 FSTL4Q6MZW2 842 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 LRSAM1Q6UWE0 723 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 FGD2Q7Z6J4 655 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 FAM9BQ8IZU0 186 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 LILRB2Q8N423 598 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 C2orf69Q8N8R5 385 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 SH3RF3Q8TEJ3 882 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 SREK1Q8WXA9 508 aaKnown RBP4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 GBP4Q96PP9 640 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 MRPL4Q9BYD3 311 aaKnown RBP4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 CELF4Q9BZC1 486 aaKnown RBP4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 C12orf65Q9H3J6 166 aaKnown RBP4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 SEC61A2Q9H9S3 476 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 KCNH7Q9NS40 1196 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 BTBD7Q9P203 1132 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 CDC42EP3Q9UKI2 254 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 NSD2O96028 1365 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 PIK3R4Q99570 1358 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 NPC1L1Q9UHC9 1359 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 PLEKHH1Q9ULM0 1364 aa4.99□□□□□ -1.61
HMGB3P20-201ENST00000417997 PPIP5K1Q6PFW1 1433 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 CCDC163A0A0D9SF12 145 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 TCRBV16S1A1N1A0A5B0 115 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 SLC12A8A0AV02 714 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 FOXP2O15409 715 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 ZNF623O75123 536 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 ECE1P42892 770 aa4.98□□□□□ -1.61
HMGB3P20-201ENST00000417997 RAC3P60763 192 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms