RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 IFT122Q9HBG6 1241 aa25.6■■□□□ 1.69
SMARCB1-205ENST00000417137 ZSCAN20P17040 1043 aaPredicted RBP25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 GLRA2P23416 452 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 SLC12A3P55017 1021 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 PPP2R5AQ15172 486 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 C1orf186Q6ZWK4 172 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 SLC17A8Q8NDX2 589 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 ASAP3Q8TDY4 903 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 RAD54LQ92698 747 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 IFT74Q96LB3 600 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 GPRC5CQ9NQ84 441 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 RNF216Q9NWF9 866 aaPredicted RBP25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 STK17AQ9UEE5 414 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 PCDHA7Q9UN72 937 aa25.59■■□□□ 1.69
SMARCB1-205ENST00000417137 TET1Q8NFU7 2136 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 DENND3A2RUS2 1198 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 PTENP60484 403 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 PCBP1Q15365 356 aaKnown RBP eCLIP25.58■■□□□ 1.693e-10■■■□□ 18.2
SMARCB1-205ENST00000417137 RAB30Q15771 203 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 GPR153Q6NV75 609 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 HERC6Q8IVU3 1022 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 MYOCDQ8IZQ8 938 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 DRC1Q96MC2 740 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 ZBED2Q9BTP6 218 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 TSPYL2Q9H2G4 693 aaPredicted RBP25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 KCNG1Q9UIX4 513 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 MSRAQ9UJ68 235 aa25.58■■□□□ 1.69
SMARCB1-205ENST00000417137 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 SOX1O00570 391 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 GUCY2CP25092 1073 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 DEFB103AP81534 67 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 CAPSQ13938 189 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 CATSPER4Q7RTX7 472 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 IFNLR1Q8IU57 520 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 LEO1Q8WVC0 666 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 LARP4BQ92615 738 aaKnown RBP25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 RUSC1Q9BVN2 902 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 NFKBIZQ9BYH8 718 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 TMX1Q9H3N1 280 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 CHST12Q9NRB3 414 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 C1orf112Q9NSG2 853 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 BLOC1S4Q9NUP1 217 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 FAM13BQ9NYF5 915 aa25.57■■□□□ 1.68
SMARCB1-205ENST00000417137 LRRIQ4A6NIV6 560 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 GRXCR1A8MXD5 290 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 CSDE1O75534 798 aaKnown RBP25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 NCBP1Q09161 790 aaKnown RBP25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 DHX8Q14562 1220 aaKnown RBP25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 AXDND1Q5T1B0 1012 aaPredicted RBP25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 FAM109BQ6ICB4 259 aaPredicted RBP25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 TOP1MTQ969P6 601 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 LRCH3Q96II8 777 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 ADAM2Q99965 735 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 C2orf40Q9H1Z8 148 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 C17orf75Q9HAS0 396 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 RGS18Q9NS28 235 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 PCDHA11Q9Y5I1 949 aa25.56■■□□□ 1.68
SMARCB1-205ENST00000417137 HIP1RO75146 1068 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 FGFR4P22455 802 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 STAT6P42226 847 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 NAMPTP43490 491 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 MCM6Q14566 821 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 SHC4Q6S5L8 630 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 RTN4RL1Q86UN2 441 aaPredicted RBP25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 GPBP1Q86WP2 473 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 ZBTB8OSQ8IWT0 167 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 DEPTORQ8TB45 409 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 PANK2Q9BZ23 570 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 DACT1Q9NYF0 836 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 ARID2Q68CP9 1835 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 MYH15Q9Y2K3 1946 aa25.55■■□□□ 1.68
SMARCB1-205ENST00000417137 INO80B-WBP1J3KQ70 363 aa25.54■■□□□ 1.68
SMARCB1-205ENST00000417137 ERLIN2O94905 339 aa25.54■■□□□ 1.68
SMARCB1-205ENST00000417137 GJB5O95377 273 aa25.54■■□□□ 1.68
SMARCB1-205ENST00000417137 STAG3L1P0CL83 205 aa25.54■■□□□ 1.68
SMARCB1-205ENST00000417137 SLC24A5Q71RS6 500 aa25.54■■□□□ 1.68
SMARCB1-205ENST00000417137 SV2BQ7L1I2 683 aa25.54■■□□□ 1.68
SMARCB1-205ENST00000417137 TLL1O43897 1013 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 KRT18P05783 430 aaKnown RBP25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 DSC3Q14574 896 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 ADALQ6DHV7 355 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 PDILTQ8N807 584 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 RAD9AQ99638 391 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 PYM1Q9BRP8 204 aaKnown RBP25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 PBX4Q9BYU1 374 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 MINDY3Q9H8M7 445 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 POLD4Q9HCU8 107 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 CHMP5Q9NZZ3 219 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 LRFN2Q9ULH4 789 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 ODF2LQ9ULJ1 636 aa25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 RBM19Q9Y4C8 960 aaKnown RBP25.53■■□□□ 1.68
SMARCB1-205ENST00000417137 SIP14410 1827 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 DLL1O00548 723 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 MGEA5O60502 916 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 UPP2O95045 317 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 AXLP30530 894 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 SARSP49591 514 aaKnown RBP25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 EFNA5P52803 228 aa25.52■■□□□ 1.68
SMARCB1-205ENST00000417137 RABGGTBP53611 331 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms