RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 PRPF31Q8WWY3 499 aaKnown RBP20.01■□□□□ 0.79
CPNE1-210ENST00000416778 LLPHQ9BRT6 129 aaKnown RBP20.01■□□□□ 0.79
CPNE1-210ENST00000416778 LXNQ9BS40 222 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 TRAIPQ9BWF2 469 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 INO80BQ9C086 356 aaPredicted RBP20.01■□□□□ 0.79
CPNE1-210ENST00000416778 IFT122Q9HBG6 1241 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 AAASQ9NRG9 546 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 CLDND1Q9NY35 253 aa20.01■□□□□ 0.79
CPNE1-210ENST00000416778 HOXA2O43364 376 aa20■□□□□ 0.79
CPNE1-210ENST00000416778 DLX2Q07687 328 aaPredicted RBP20■□□□□ 0.79
CPNE1-210ENST00000416778 SPOUT1Q5T280 376 aaKnown RBP20■□□□□ 0.79
CPNE1-210ENST00000416778 EP400NLQ6ZTU2 488 aa20■□□□□ 0.79
CPNE1-210ENST00000416778 CCDC83Q8IWF9 413 aa20■□□□□ 0.79
CPNE1-210ENST00000416778 TPH2Q8IWU9 490 aa20■□□□□ 0.79
CPNE1-210ENST00000416778 COLGALT1Q8NBJ5 622 aa20■□□□□ 0.79
CPNE1-210ENST00000416778 EIF2AK1Q9BQI3 630 aaKnown RBP20■□□□□ 0.79
CPNE1-210ENST00000416778 IGFLR1Q9H665 355 aa20■□□□□ 0.79
CPNE1-210ENST00000416778 DACT1Q9NYF0 836 aa20■□□□□ 0.79
CPNE1-210ENST00000416778 FGF18O76093 207 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 LYPLA2O95372 231 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 IL9P15248 144 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 ATF7P17544 494 aaPredicted RBP19.99■□□□□ 0.79
CPNE1-210ENST00000416778 RFC5P40937 340 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 TXKP42681 527 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 UBE3AQ05086 875 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 CALCRLQ16602 461 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 CLLU1OSQ5K130 101 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 ADGRD2Q7Z7M1 963 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 SLC7A3Q8WY07 619 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 TMEM143Q96AN5 459 aa19.99■□□□□ 0.79
CPNE1-210ENST00000416778 ZSCAN31Q96LW9 406 aaPredicted RBP19.99■□□□□ 0.79
CPNE1-210ENST00000416778 TTC12Q9H892 705 aaPredicted RBP19.99■□□□□ 0.79
CPNE1-210ENST00000416778 LINC01565O15544 149 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 CSPG5O95196 566 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 SRGAP2CP0DJJ0 459 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 ERVFC1P60507 584 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 GUCY1B3Q02153 619 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 CYP4A11Q02928 519 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 CSPP1Q1MSJ5 1256 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 XKR9Q5GH70 373 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 TMEM60Q9H2L4 133 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 COL4A3BPQ9Y5P4 624 aa19.98■□□□□ 0.79
CPNE1-210ENST00000416778 ASAP2O43150 1006 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 ZNF623O75123 536 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 LAG3P18627 525 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 SFPQP23246 707 aaKnown RBP eCLIP19.97■□□□□ 0.798e-7■□□□□ 11.1
CPNE1-210ENST00000416778 PHKA2P46019 1235 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 POLGP54098 1239 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-210ENST00000416778 PLCB3Q01970 1234 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 LAMTOR4Q0VGL1 99 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 RNF169Q8NCN4 708 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 MICAL1Q8TDZ2 1067 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 KHSRPQ92945 711 aaKnown RBP eCLIP19.97■□□□□ 0.798e-8■■■□□ 15.7
CPNE1-210ENST00000416778 NLRP4Q96MN2 994 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 EPHX3Q9H6B9 360 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 PCDHGC5Q9Y5F6 944 aa19.97■□□□□ 0.79
CPNE1-210ENST00000416778 NEMFO60524 1076 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 XRCC6P12956 609 aaKnown RBP eCLIP19.96■□□□□ 0.79
CPNE1-210ENST00000416778 SAFBQ15424 915 aaKnown RBP eCLIP19.96■□□□□ 0.791e-17■■■■□ 20.2
CPNE1-210ENST00000416778 KCNT2Q6UVM3 1135 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 CATSPER4Q7RTX7 472 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 SRGAP1Q7Z6B7 1085 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 THNSL1Q8IYQ7 743 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 ABI1Q8IZP0 508 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 GJD3Q8N144 294 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 EFHBQ8N7U6 833 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 FBXO18Q8NFZ0 1043 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 TCP11Q8WWU5 503 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 PSPC1Q8WXF1 523 aaKnown RBP19.96■□□□□ 0.79
CPNE1-210ENST00000416778 C8orf76Q96K31 380 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 MINDY3Q9H8M7 445 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 ANKEF1Q9NU02 776 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 LZTS1Q9Y250 596 aa19.96■□□□□ 0.79
CPNE1-210ENST00000416778 FNDC1Q4ZHG4 1894 aaPredicted RBP19.96■□□□□ 0.79
CPNE1-210ENST00000416778 A0A087WWV3 80 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 FSCN2O14926 492 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 GAS2O43903 313 aaKnown RBP19.95■□□□□ 0.78
CPNE1-210ENST00000416778 ATP2B1P20020 1258 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 HOXA11P31270 313 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-210ENST00000416778 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
CPNE1-210ENST00000416778 EMC2Q15006 297 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 RBM23Q86U06 439 aaKnown RBP19.95■□□□□ 0.78
CPNE1-210ENST00000416778 FERMT3Q86UX7 667 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 HELQQ8TDG4 1101 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 MRPS27Q92552 414 aaKnown RBP19.95■□□□□ 0.78
CPNE1-210ENST00000416778 PPP2R3CQ969Q6 453 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 FOXP1Q9H334 677 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-210ENST00000416778 TLE6Q9H808 572 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 XPNPEP1Q9NQW7 623 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 TLR9Q9NR96 1032 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 SH2B1Q9NRF2 756 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-210ENST00000416778 CLEC1BQ9P126 229 aa19.95■□□□□ 0.78
CPNE1-210ENST00000416778 TBX10O75333 385 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 SPATA31C1P0DKV0 1188 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 SKIP12755 728 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 MCM7P33993 719 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 NRIP1P48552 1158 aa19.94■□□□□ 0.78
CPNE1-210ENST00000416778 TWF2Q6IBS0 349 aaKnown RBP19.94■□□□□ 0.78
CPNE1-210ENST00000416778 PDE12Q6L8Q7 609 aaKnown RBP19.94■□□□□ 0.78
CPNE1-210ENST00000416778 MRPL10Q7Z7H8 261 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms