RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 DPP9Q86TI2 863 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 MCPH1Q8NEM0 835 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 BORCS6Q96GS4 357 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 PARK7Q99497 189 aaKnown RBP11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 GPR20Q99678 358 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 AZI2Q9H6S1 392 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 PDLIM7Q9NR12 457 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 DMAC2Q9NW81 257 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 TBX20Q9UMR3 447 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 SLC45A1Q9Y2W3 748 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 EPN1Q9Y6I3 576 aaPredicted RBP11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 CENPFP49454 3210 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 IGKV6D-21A0A0A0MT36 114 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 ASB14A6NK59 587 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 NDUFA10O95299 355 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 ARID5AQ03989 594 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 ALCAMQ13740 583 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 TRIM65Q6PJ69 517 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 GPR142Q7Z601 462 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 KIF18AQ8NI77 898 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 GOLGA5Q8TBA6 731 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 BAP1Q92560 729 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 NHEJ1Q9H9Q4 299 aaPredicted RBP11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 GNG11P61952 73 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 DLG4P78352 724 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 TTLL4Q14679 1199 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZNF792Q3KQV3 632 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 CCDC62Q6P9F0 684 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 SLC7A3Q8WY07 619 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 NRBP2Q9NSY0 501 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 HSPBP1Q9NZL4 362 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 MORF4L1Q9UBU8 362 aa11.67□□□□□ -0.54
SMPD4P1-201ENST00000416717 LRRIQ4A6NIV6 560 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 IGF2BP3O00425 579 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 ETF1P62495 437 aaKnown RBP11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 GRM1Q13255 1194 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 DRP2Q13474 957 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 RAPGEF1Q13905 1077 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 MEA1Q16626 185 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 NFIL3Q16649 462 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 EXOC3L4Q17RC7 722 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 PDXDC1Q6P996 788 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 KCNV1Q6PIU1 500 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 RASAL3Q86YV0 1011 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 ASAP3Q8TDY4 903 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 TSC1Q92574 1164 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZBTB10Q96DT7 871 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 BICD1Q96G01 975 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 PRIMPOLQ96LW4 560 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 WDR24Q96S15 920 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 GCNT4Q9P109 453 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 CEP72Q9P209 647 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 REXO2Q9Y3B8 237 aaKnown RBP11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 FANCGO15287 622 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 PON1P27169 355 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 CNGA1P29973 690 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 ADCYAP1R1P41586 468 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 CBWD6Q4V339 395 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 CBWD3Q5JTY5 395 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 CBWD5Q5RIA9 395 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 GBP6Q6ZN66 633 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 SCFD2Q8WU76 684 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 TRAPPC12Q8WVT3 735 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 CCDC42Q96M95 316 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 MKNK1Q9BUB5 465 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 NIFKQ9BYG3 293 aaKnown RBP11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 ST6GALNAC4Q9H4F1 302 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 DHX33Q9H6R0 707 aaKnown RBP11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 ARHGAP20Q9P2F6 1191 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 PLAGL2Q9UPG8 496 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
SMPD4P1-201ENST00000416717 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 GOLGA6L9A6NEM1 432 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 KIF2AO00139 706 aaPredicted RBP11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 HNRNPDLO14979 420 aaKnown RBP11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 KRT13P13646 458 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 ADSSP30520 456 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 EIF4A3P38919 411 aaKnown RBP11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 PPP2R3AQ06190 1150 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 BFSP1Q12934 665 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 ARHGAP29Q52LW3 1261 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 TDRD12Q587J7 1177 aaKnown RBP11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 TAPT1Q6NXT6 567 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 SLC39A4Q6P5W5 647 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 SLC9A9Q8IVB4 645 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 MORC4Q8TE76 937 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 SPIRE2Q8WWL2 714 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 IQCDQ96DY2 449 aa11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZNF668Q96K58 619 aaPredicted RBP11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 NTPCRQ9BSD7 190 aaKnown RBP11.65□□□□□ -0.54
SMPD4P1-201ENST00000416717 GANQ9H2C0 597 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms