RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 KRT76Q01546 638 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 PDE1CQ14123 709 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 EFCAB13Q8IY85 973 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 SPON1Q9HCB6 807 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 SARS2Q9NP81 518 aaKnown RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 ABHD10Q9NUJ1 306 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 PPP1R12AO14974 1030 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 FOXN1O15353 648 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 IFT88Q13099 833 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 MAML1Q92585 1016 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 PACSIN2Q9UNF0 486 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF500O60304 480 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 SZRD1Q7Z422 152 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 SLC9A2Q9UBY0 812 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 IQSEC2Q5JU85 1478 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 SPATA31A1Q5TZJ5 1347 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 TNPO2O14787 897 aaKnown RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 TXNP10599 105 aaKnown RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 TTC25Q96NG3 672 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 MOCS2O96007 188 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 MYBP10242 640 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 TMEM143Q96AN5 459 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 FAM20AQ96MK3 541 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 PHLPP2Q6ZVD8 1323 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 LIG3P49916 1009 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 FAM133BQ5BKY9 247 aaKnown RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 ANGPTL8Q6UXH0 198 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 RNF149Q8NC42 400 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 FAM8A1Q9UBU6 413 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 NFU1Q9UMS0 254 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 PI4K2BG5E9Z4 385 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 COG7P83436 770 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF211Q13398 564 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-203ENST00000416123 SIK2Q9H0K1 926 aa11.37□□□□□ -0.59
COL12A1-203ENST00000416123 MFAP3LO75121 409 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 EPHB4P54760 987 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 FRA10AC1Q70Z53 315 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 RABGGTAQ92696 567 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 BCAP29Q9UHQ4 241 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 PIN4Q9Y237 131 aaKnown RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 RWDD2BP57060 319 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 KDELC2Q7Z4H8 507 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 NEMP1O14524 444 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 TRIM49P0CI25 452 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 TRIM49CP0CI26 452 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 YWHAHQ04917 246 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 EZH2Q15910 746 aaKnown RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 FAM117BQ6P1L5 589 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 ZMYND12Q9H0C1 365 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 CPB1P15086 417 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 ITPK1Q13572 414 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 C12orf60Q5U649 245 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 SCYL3Q8IZE3 742 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 C11orf70Q9BRQ4 267 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 GGA3Q9NZ52 723 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 SFNP31947 248 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 GNGT2O14610 69 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 GSTA4O15217 222 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 KITP10721 976 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 GRIK1P39086 918 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 PSMC5P62195 406 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 VPS72Q15906 364 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 SYCP2LQ5T4T6 812 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 PPWD1Q96BP3 646 aaKnown RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 SAYSD1Q9NPB0 183 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 DAGLAQ9Y4D2 1042 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 EMSYQ7Z589 1322 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 ZNF609O15014 1411 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 IQCA1LA6NCM1 817 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 DFFAO00273 331 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 DRAP1Q14919 205 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 DCAF4L1Q3SXM0 396 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 CCDC38Q502W7 563 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 STRIP1Q5VSL9 837 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 SDCCAG3Q96C92 435 aa11.36□□□□□ -0.59
COL12A1-203ENST00000416123 MMTAG2Q9BU76 263 aaKnown RBP11.36□□□□□ -0.59
COL12A1-203ENST00000416123 SUN1O94901 812 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 KRT10P13645 584 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 NMT1P30419 496 aaKnown RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 STX1BP61266 288 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 TRIM67Q6ZTA4 783 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 FGD4Q96M96 766 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 CEP72Q9P209 647 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 AGO2Q9UKV8 859 aaKnown RBP11.35□□□□□ -0.59
COL12A1-203ENST00000416123 SCINQ9Y6U3 715 aa11.35□□□□□ -0.59
COL12A1-203ENST00000416123 DPYSL4O14531 572 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms