RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SETD4Q9NVD3 440 aa10.22□□□□□ -0.77
CHRNA1-206ENST00000416004 GDAQ9Y2T3 454 aa10.22□□□□□ -0.77
CHRNA1-206ENST00000416004 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
CHRNA1-206ENST00000416004 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 CAVIN2O95810 425 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 ACTR2P61160 394 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 KRT76Q01546 638 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 RASIP1Q5U651 963 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 PLPPR4Q7Z2D5 763 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 GPBP1Q86WP2 473 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 MLKLQ8NB16 471 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 BPIFA3Q9BQP9 254 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 BHMT2Q9H2M3 363 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 SEMA6BQ9H3T3 888 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 DNM3Q9UQ16 869 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 PCDHA11Q9Y5I1 949 aa10.21□□□□□ -0.77
CHRNA1-206ENST00000416004 GBF1Q92538 1859 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 ABHD14A-ACY1A0A1B0GW23 586 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 GSTTP1A0A1W2PQM5 241 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 WDR64B1ANS9 1081 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 TREHO43280 583 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 RHOBTB3O94955 611 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 EYA4O95677 639 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 PSAPP07602 524 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 AMPD3Q01432 767 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 RAD51AP2Q09MP3 1159 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 KCNB1Q14721 858 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 GRIK4Q16099 956 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 UVSSAQ2YD98 709 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF618Q5T7W0 954 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF746Q6NUN9 644 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 CNNM4Q6P4Q7 775 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 TRIM50Q86XT4 487 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 SYT2Q8N9I0 419 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 SEPT8Q92599 483 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 RUSC1Q9BVN2 902 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 NAT10Q9H0A0 1025 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 HSD3B7Q9H2F3 369 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF576Q9H609 170 aa10.21□□□□□ -0.78
CHRNA1-206ENST00000416004 TMEM150BA6NC51 233 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 LGR5O75473 907 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 AMHP03971 560 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 P4HBP07237 508 aaKnown RBP10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 FOSL2P15408 326 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 JAK3P52333 1124 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 IGBP1P78318 339 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF200P98182 395 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 STK4Q13043 487 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF658Q5TYW1 1059 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 IER5Q5VY09 327 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 PPP2R2DQ66LE6 453 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 KLHL10Q6JEL2 608 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 LMBR1Q8WVP7 490 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 APBB2Q92870 758 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 PBX4Q9BYU1 374 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 POLD4Q9HCU8 107 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF302Q9NR11 478 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 EXOC1Q9NV70 894 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 RMND1Q9NWS8 449 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 MAPK8IP1Q9UQF2 711 aa10.2□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF862O60290 1169 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 HBP1O60381 514 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 IDEP14735 1019 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 SFNP31947 248 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 PRCPP42785 496 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 QARSP47897 775 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 EHHADHQ08426 723 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 ABHD15Q6UXT9 468 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 CCDC60Q8IWA6 550 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 KIAA0895Q8NCT3 520 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 GLIS3Q8NEA6 775 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 NEK9Q8TD19 979 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 DHX38Q92620 1227 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 FAM167AQ96KS9 214 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 NACC1Q96RE7 527 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 ZSWIM4Q9H7M6 989 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 CXXC1Q9P0U4 656 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 RANBP2P49792 3224 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 UQCRHLA0A096LP55 91 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 PVALEFA0A1B0GWK0 134 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 BECN2A8MW95 431 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 TLL1O43897 1013 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 LYPLA2O95372 231 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 CXCL10P02778 98 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 UQCRHP07919 91 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 CTSHP09668 335 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 MUTP22033 750 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 HOXC8P31273 242 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 STX17P56962 302 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 MYL5Q02045 173 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 COASYQ13057 564 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 GIT2Q14161 759 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 ODR4Q5SWX8 454 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 RINT1Q6NUQ1 792 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 KCTD17Q8N5Z5 321 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 RDM1Q8NG50 284 aa10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 CDX2Q99626 313 aaPredicted RBP10.19□□□□□ -0.78
CHRNA1-206ENST00000416004 SH2D3AQ9BRG2 576 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms