RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 NPHS1O60500 1241 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 USP2O75604 605 aaPredicted RBP7.49□□□□□ -1.21
EPHA4-204ENST00000415749 ASLP04424 464 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 C6orf222P0C671 652 aaPredicted RBP7.49□□□□□ -1.21
EPHA4-204ENST00000415749 JMJD7P0C870 316 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 ZSCAN20P17040 1043 aaPredicted RBP7.49□□□□□ -1.21
EPHA4-204ENST00000415749 EIF5P55010 431 aaKnown RBP7.49□□□□□ -1.21
EPHA4-204ENST00000415749 IRX6P78412 446 aaPredicted RBP7.49□□□□□ -1.21
EPHA4-204ENST00000415749 NR0B2Q15466 257 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 HSP90AB4PQ58FF6 505 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 GALNT18Q6P9A2 607 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 RTKN2Q8IZC4 609 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 LILRA2Q8N149 483 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 GPC2Q8N158 579 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 SYNE4Q8N205 404 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 TMEM52Q8NDY8 209 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 SVIPQ8NHG7 77 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 JPH3Q8WXH2 748 aaPredicted RBP7.49□□□□□ -1.21
EPHA4-204ENST00000415749 ADAMTS6Q9UKP5 1117 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 PNMA2Q9UL42 364 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 NPFFR2Q9Y5X5 522 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 NRXN2Q9P2S2 1712 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 TNKSO95271 1327 aa7.49□□□□□ -1.21
EPHA4-204ENST00000415749 DLEC1Q9Y238 1755 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 TNRC18O15417 2968 aaPredicted RBP7.48□□□□□ -1.21
EPHA4-204ENST00000415749 ADAMTS7Q9UKP4 1686 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 SLX4Q8IY92 1834 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 NEMP1O14524 444 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 WDHD1O75717 1129 aaPredicted RBP7.48□□□□□ -1.21
EPHA4-204ENST00000415749 STARD3NLO95772 234 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 IARSP41252 1262 aaKnown RBP7.48□□□□□ -1.21
EPHA4-204ENST00000415749 EPS15P42566 896 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 TNNT2P45379 298 aaPredicted RBP7.48□□□□□ -1.21
EPHA4-204ENST00000415749 ID4P47928 161 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 GTF2A2P52657 109 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 CORO7P57737 925 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 ST5P78524 1137 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 ZRSR2Q15696 482 aaKnown RBP7.48□□□□□ -1.21
EPHA4-204ENST00000415749 NTRK3Q16288 839 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 CFAP100Q494V2 611 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 C10orf62Q5T681 223 aaPredicted RBP7.48□□□□□ -1.21
EPHA4-204ENST00000415749 SYDE2Q5VT97 1194 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 CIAPIN1Q6FI81 312 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 DENND5AQ6IQ26 1287 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 NBPF11Q86T75 865 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 SAPCD2Q86UD0 394 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 SLCO6A1Q86UG4 719 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 DGKHQ86XP1 1220 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 CPNE8Q86YQ8 564 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 CNBD1Q8NA66 436 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 PHF20Q9BVI0 1012 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 IFT22Q9H7X7 185 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 SPEF1Q9Y4P9 236 aa7.48□□□□□ -1.21
EPHA4-204ENST00000415749 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-204ENST00000415749 BLACEA4D250 179 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 NRDCO43847 1150 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 RFPL1O75677 317 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 ABLIM3O94929 683 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 HPXP02790 462 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 CENPBP07199 599 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-204ENST00000415749 PYGMP11217 842 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 FLT3P36888 993 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 AFMP43652 599 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 RPL11P62913 178 aaKnown RBP7.47□□□□□ -1.21
EPHA4-204ENST00000415749 TCIRG1Q13488 830 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 HSF5Q4G112 596 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-204ENST00000415749 SPTY2D1Q68D10 685 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-204ENST00000415749 OLFM4Q6UX06 510 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 IFNL3Q8IZI9 196 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 ABI1Q8IZP0 508 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 GSTCDQ8NEC7 633 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 MYLIPQ8WY64 445 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 RHOBTB2Q9BYZ6 727 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 MAF1Q9H063 256 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 GNL3LQ9NVN8 582 aaKnown RBP7.47□□□□□ -1.21
EPHA4-204ENST00000415749 EBF1Q9UH73 591 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 IP6K2Q9UHH9 426 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 TMEFF2Q9UIK5 374 aaPredicted RBP7.47□□□□□ -1.21
EPHA4-204ENST00000415749 CTNND2Q9UQB3 1225 aa7.47□□□□□ -1.21
EPHA4-204ENST00000415749 C7orf72A4D263 438 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 VSTM5A8MXK1 200 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 RNMTO43148 476 aaKnown RBP7.46□□□□□ -1.22
EPHA4-204ENST00000415749 CELF2O95319 508 aaKnown RBP7.46□□□□□ -1.22
EPHA4-204ENST00000415749 FOSP01100 380 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-204ENST00000415749 NPR1P16066 1061 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 IGFALSP35858 605 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 GPR85P60893 370 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 SNX17Q15036 470 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 SULT6B1Q6IMI4 303 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 USP50Q70EL3 339 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-204ENST00000415749 UBE2R2Q712K3 238 aaPredicted RBP7.46□□□□□ -1.22
EPHA4-204ENST00000415749 CCDC103Q8IW40 242 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 OR2W6PQ8NHA6 318 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.46□□□□□ -1.22
EPHA4-204ENST00000415749 GCC1Q96CN9 775 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 SCLYQ96I15 445 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 JMJD8Q96S16 334 aa7.46□□□□□ -1.22
EPHA4-204ENST00000415749 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
EPHA4-204ENST00000415749 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms