RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 GIT1Q9Y2X7 761 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 NUB1Q9Y5A7 615 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 TUBGCP6Q96RT7 1819 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 PRAG1Q86YV5 1406 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 CUL9Q8IWT3 2517 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 SMAD7O15105 426 aaKnown RBP3.7□□□□□ -1.82
LINC00428-201ENST00000415620 NKRFO15226 690 aaKnown RBP eCLIP3.7□□□□□ -1.82
LINC00428-201ENST00000415620 GRK2P25098 689 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 MSX2P35548 267 aaPredicted RBP3.7□□□□□ -1.82
LINC00428-201ENST00000415620 GRK3P35626 688 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 ETV4P43268 484 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 RRADP55042 308 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 PPP2R2AP63151 447 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 HDLBPQ00341 1268 aaKnown RBP3.7□□□□□ -1.82
LINC00428-201ENST00000415620 NOLC1Q14978 699 aaKnown RBP eCLIP3.7□□□□□ -1.82
LINC00428-201ENST00000415620 TBR1Q16650 682 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 LAIR1Q6GTX8 287 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 NT5DC4Q86YG4 428 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 TMPRSS6Q8IU80 811 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 MICAL1Q8TDZ2 1067 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 KCTD13Q8WZ19 329 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 NMRK2Q9NPI5 230 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 PLA2G3Q9NZ20 509 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 CEP72Q9P209 647 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 PKD1L3Q7Z443 1732 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 PEAK1Q9H792 1746 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 PAPPAQ13219 1627 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 CLIP1P30622 1438 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 ADAMTS13Q76LX8 1427 aa3.7□□□□□ -1.82
LINC00428-201ENST00000415620 UNC80Q8N2C7 3258 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 ADGRL2O95490 1459 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 RPRD2Q5VT52 1461 aaKnown RBP3.69□□□□□ -1.82
LINC00428-201ENST00000415620 ESYT3A0FGR9 886 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 CYP27B1O15528 508 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 DLX3O60479 287 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 KRT4P19013 534 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 RANGAP1P46060 587 aaPredicted RBP3.69□□□□□ -1.82
LINC00428-201ENST00000415620 LBX1P52954 281 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 COL10A1Q03692 680 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 DPP8Q6V1X1 898 aaPredicted RBP3.69□□□□□ -1.82
LINC00428-201ENST00000415620 LBX2Q6XYB7 198 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 KCTD1Q719H9 257 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 ORAI2Q96SN7 254 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 PHF20Q9BVI0 1012 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 ZDHHC5Q9C0B5 715 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 EPN3Q9H201 632 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 NELFAQ9H3P2 528 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 ACTR10Q9NZ32 417 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 QSER1Q2KHR3 1735 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 EIF2AK4Q9P2K8 1649 aaKnown RBP3.69□□□□□ -1.82
LINC00428-201ENST00000415620 ZFYVE9O95405 1425 aa3.69□□□□□ -1.82
LINC00428-201ENST00000415620 TNRC6CQ9HCJ0 1690 aaKnown RBP3.68□□□□□ -1.82
LINC00428-201ENST00000415620 PRXQ9BXM0 1461 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 PLEKHG1Q9ULL1 1385 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 A0A1W2PQU0 124 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 ARHGAP6O43182 974 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 NUDT3O95989 172 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 COL6A2P12110 1019 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 ATF4P18848 351 aaPredicted RBP3.68□□□□□ -1.82
LINC00428-201ENST00000415620 ADRA1BP35368 520 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 SPIRE1Q08AE8 756 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 DBPQ10586 325 aaPredicted RBP3.68□□□□□ -1.82
LINC00428-201ENST00000415620 FSTL1Q12841 308 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 KIZQ2M2Z5 673 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 SLC10A6Q3KNW5 377 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 ADGRE4PQ86SQ3 457 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 SH3RF2Q8TEC5 729 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 ZFYVE21Q9BQ24 234 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 SLC39A2Q9NP94 309 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 PTGFRNQ9P2B2 879 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 DSEQ9UL01 958 aa3.68□□□□□ -1.82
LINC00428-201ENST00000415620 COL14A1Q05707 1796 aaKnown RBP3.68□□□□□ -1.82
LINC00428-201ENST00000415620 SPTBN5Q9NRC6 3674 aaKnown RBP3.67□□□□□ -1.82
LINC00428-201ENST00000415620 NRXN3Q9Y4C0 1643 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 DUOX2Q9NRD8 1548 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 RHOBTB3O94955 611 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 GNAT1P11488 350 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 GRM7Q14831 915 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 STILQ15468 1287 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 TNNI3KQ59H18 835 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 LARP1BQ659C4 914 aaKnown RBP3.67□□□□□ -1.82
LINC00428-201ENST00000415620 LARP4Q71RC2 724 aaKnown RBP eCLIP3.67□□□□□ -1.82
LINC00428-201ENST00000415620 CXXC5Q7LFL8 322 aaKnown RBP3.67□□□□□ -1.82
LINC00428-201ENST00000415620 SLC17A8Q8NDX2 589 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 IER2Q9BTL4 223 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 TGIF2Q9GZN2 237 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 KIAA1107Q9UPP5 1409 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 FMN2Q9NZ56 1722 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 CACNA1AO00555 2505 aa3.67□□□□□ -1.82
LINC00428-201ENST00000415620 MEGF6O75095 1541 aa3.66□□□□□ -1.82
LINC00428-201ENST00000415620 VCANP13611 3396 aa3.66□□□□□ -1.82
LINC00428-201ENST00000415620 TCRBV5S4A2TA0A5A2 114 aa3.66□□□□□ -1.82
LINC00428-201ENST00000415620 PMS2P1A4D2B8 440 aa3.66□□□□□ -1.82
LINC00428-201ENST00000415620 KRTAP29-1A8MX34 341 aaPredicted RBP3.66□□□□□ -1.82
LINC00428-201ENST00000415620 CAPN14A8MX76 684 aa3.66□□□□□ -1.82
LINC00428-201ENST00000415620 GCP02774 474 aa3.66□□□□□ -1.82
LINC00428-201ENST00000415620 CTCFP49711 727 aaPredicted RBP3.66□□□□□ -1.82
LINC00428-201ENST00000415620 FXR1P51114 621 aaKnown RBP eCLIP3.66□□□□□ -1.82
LINC00428-201ENST00000415620 KRTAP10-11P60412 298 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms