RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 EPHA7Q15375 998 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 RHPN2Q8IUC4 686 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 FAM178BQ8IXR5 827 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 GJD3Q8N144 294 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 IGFLR1Q9H665 355 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 TYW1Q9NV66 732 aaKnown RBP22.88■■□□□ 1.25
PTPRU-203ENST00000415600 PRKAG3Q9UGI9 489 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 SMC3Q9UQE7 1217 aa22.88■■□□□ 1.25
PTPRU-203ENST00000415600 GAS2O43903 313 aaKnown RBP22.87■■□□□ 1.25
PTPRU-203ENST00000415600 FGFR1P11362 822 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 RFC5P40937 340 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 HYAL1Q12794 435 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 SAFBQ15424 915 aaKnown RBP eCLIP22.87■■□□□ 1.25
PTPRU-203ENST00000415600 CTC1Q2NKJ3 1217 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 ANO5Q75V66 913 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 RNF169Q8NCN4 708 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 OXER1Q8TDS5 423 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 CEP170P1Q96L14 293 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 MRPL9Q9BYD2 267 aaKnown RBP22.87■■□□□ 1.25
PTPRU-203ENST00000415600 TLR9Q9NR96 1032 aa22.87■■□□□ 1.25
PTPRU-203ENST00000415600 A0A0U1RQF3 1178 aa22.86■■□□□ 1.25
PTPRU-203ENST00000415600 NDUFV1P49821 464 aa22.86■■□□□ 1.25
PTPRU-203ENST00000415600 ECHDC2Q86YB7 292 aa22.86■■□□□ 1.25
PTPRU-203ENST00000415600 C4orf19Q8IY42 314 aa22.86■■□□□ 1.25
PTPRU-203ENST00000415600 COLGALT1Q8NBJ5 622 aa22.86■■□□□ 1.25
PTPRU-203ENST00000415600 ZNF668Q96K58 619 aaPredicted RBP22.86■■□□□ 1.25
PTPRU-203ENST00000415600 POP1Q99575 1024 aaKnown RBP22.86■■□□□ 1.25
PTPRU-203ENST00000415600 ZSWIM4Q9H7M6 989 aa22.86■■□□□ 1.25
PTPRU-203ENST00000415600 EML1O00423 815 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 FGF18O76093 207 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 STBD1O95210 358 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 KRT17Q04695 432 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 NCAPH2Q6IBW4 605 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 POTEDQ86YR6 584 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 NSUN7Q8NE18 718 aaKnown RBP22.85■■□□□ 1.25
PTPRU-203ENST00000415600 TCP11Q8WWU5 503 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 LXNQ9BS40 222 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 GJB4Q9NTQ9 266 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 LZTS1Q9Y250 596 aa22.85■■□□□ 1.25
PTPRU-203ENST00000415600 SRGAP2BP0DMP2 458 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 IL9P15248 144 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 RAB27AP51159 221 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 BMS1Q14692 1282 aaKnown RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 CALCRLQ16602 461 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 TWF2Q6IBS0 349 aaKnown RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 EFHBQ8N7U6 833 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 PSPC1Q8WXF1 523 aaKnown RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 HAS1Q92839 578 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 NLRP4Q96MN2 994 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 CCDC43Q96MW1 224 aaKnown RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 ZNF558Q96NG5 402 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 CDCA3Q99618 268 aaPredicted RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 PCDHA12Q9UN75 941 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 A0A087WZ62 844 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 TMEM150BA6NC51 233 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 FDPSP14324 419 aaKnown RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 PTMSP20962 102 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 YWHABP31946 246 aaKnown RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 NR5A1Q13285 461 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 DRP2Q13474 957 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 CAMK1Q14012 370 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 CATSPER4Q7RTX7 472 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 CEP89Q96ST8 783 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 SH2D3AQ9BRG2 576 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 FDXACB1Q9BRP7 624 aaPredicted RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 TRAIPQ9BWF2 469 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 TLE6Q9H808 572 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 CD207Q9UJ71 328 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 PIN4Q9Y237 131 aaKnown RBP22.84■■□□□ 1.25
PTPRU-203ENST00000415600 COL4A3BPQ9Y5P4 624 aa22.84■■□□□ 1.25
PTPRU-203ENST00000415600 ASAP2O43150 1006 aa22.83■■□□□ 1.25
PTPRU-203ENST00000415600 DNAJB1P25685 340 aa22.83■■□□□ 1.25
PTPRU-203ENST00000415600 ADAM15Q13444 863 aa22.83■■□□□ 1.25
PTPRU-203ENST00000415600 SMAD4Q13485 552 aaKnown RBP22.83■■□□□ 1.25
PTPRU-203ENST00000415600 PLA2G4FQ68DD2 849 aa22.83■■□□□ 1.25
PTPRU-203ENST00000415600 DIS3L2Q8IYB7 885 aaKnown RBP22.83■■□□□ 1.25
PTPRU-203ENST00000415600 CASD1Q96PB1 797 aa22.83■■□□□ 1.25
PTPRU-203ENST00000415600 FNDC1Q4ZHG4 1894 aaPredicted RBP22.82■■□□□ 1.24
PTPRU-203ENST00000415600 NEMFO60524 1076 aa22.82■■□□□ 1.24
PTPRU-203ENST00000415600 ALADP13716 330 aa22.82■■□□□ 1.24
PTPRU-203ENST00000415600 GJB2P29033 226 aa22.82■■□□□ 1.24
PTPRU-203ENST00000415600 NRIP1P48552 1158 aa22.82■■□□□ 1.24
PTPRU-203ENST00000415600 PLCB3Q01970 1234 aa22.82■■□□□ 1.24
PTPRU-203ENST00000415600 NGRNQ9NPE2 291 aaKnown RBP22.82■■□□□ 1.24
PTPRU-203ENST00000415600 COL9A1P20849 921 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 FGFR4P22455 802 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 LTBRP36941 435 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 XKR9Q5GH70 373 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 KCNT2Q6UVM3 1135 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 SRGAP1Q7Z6B7 1085 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 TPH2Q8IWU9 490 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 ADHFE1Q8IWW8 467 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 MRPS27Q92552 414 aaKnown RBP22.81■■□□□ 1.24
PTPRU-203ENST00000415600 TNFRSF25Q93038 417 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 DHX33Q9H6R0 707 aaKnown RBP22.81■■□□□ 1.24
PTPRU-203ENST00000415600 CWH43Q9H720 699 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 ENTPD7Q9NQZ7 604 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 SPG21Q9NZD8 308 aa22.81■■□□□ 1.24
PTPRU-203ENST00000415600 PDIA4P13667 645 aaKnown RBP22.8■■□□□ 1.24
PTPRU-203ENST00000415600 IRS1P35568 1242 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms